KEGG   Rhodoferax ferrireducens: Rfer_1790
Entry
Rfer_1790         CDS       T00334                                 
Name
(GenBank) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
rfr  Rhodoferax ferrireducens
Brite
KEGG Orthology (KO) [BR:rfr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rfr03016]
    Rfer_1790
Enzymes [BR:rfr01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     Rfer_1790
Transfer RNA biogenesis [BR:rfr03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    Rfer_1790
 Prokaryotic type
    Rfer_1790
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-ProteinID: ABD69519
UniProt: Q21XI4
Position
complement(1925966..1926748)
AA seq 260 aa
MRLALGVSYNGQAYQGWQSQLSRQTVQDQLEMALSKLASHRVSTLCAGRTDAGVHGLMQV
IHFDTPLDRAPNSWVRGTNALLPRDIAVEWARPVPPEFHCRASALSRRYAYILLESPVRP
SIDAGQVGWTFKPLEQVAMQQAASHLLGEHDFSSFRASACQALSPVKMLQRLDISRHGAC
WRFEFEANAFLHHMIRNIMGCLITVGQGKKPPEWLKEVLLARNRNVAAPTFSAHGLYFLG
PRYAPHWGLPDRTPAFDRLP
NT seq 783 nt   +upstreamnt  +downstreamnt
gtgaggctggcactcggcgtcagctacaacgggcaagcctaccaaggctggcaaagccag
ttgtcgaggcaaaccgtgcaggaccagcttgaaatggcactgagcaaattggcatcgcac
cgggtttctaccctgtgtgcaggtcgaacagacgcgggggtgcatggcctgatgcaggtg
attcattttgataccccacttgatcgcgcccccaattcctgggtacggggcaccaatgct
ctcttgccgcgcgacattgcggtcgagtgggccaggcccgtgccccctgaatttcattgc
cgtgccagcgcgctgtcacgccgctatgcctatattttgctggaatcaccagtgcgcccc
agcatcgatgcgggccaggtcggttggactttcaaaccgctggaacaggtggccatgcag
caggcggcgagccacttgctgggtgagcacgacttcagttcgtttcgggcatcggcctgc
caggcgctgtcgccagtcaaaatgctgcagcgcctcgacatctcgcgccatggtgcctgc
tggcgttttgagtttgaggccaacgcttttttgcatcacatgatccgcaacatcatgggt
tgcctgattaccgtgggccaaggcaaaaaacctcccgagtggctcaaagaggtgctgctg
gcgcgcaaccgcaatgttgcggcgccgaccttttccgcgcacggactctattttctgggg
ccgcgctatgcgccgcactggggtttgccggatcgcacccctgcctttgatcgattgcca
tga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

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