KEGG T00334: Rfer

Rhodoferax ferrireducens: Rfer_2160

Entry

Rfer_2160 CDS T00334

Definition

trehalose synthase-like protein

Orthology

K05343

maltose alpha-D-glucosyltransferase/ alpha-amylase [EC:5.4.99.16 3.2.1.1]

Organism

rfr Rhodoferax ferrireducens

Pathway

rfr00500	Starch and sucrose metabolism
rfr01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Starch and sucrose metabolism [PATH:rfr00500]

SSDB

Motif

Pfam:

Alpha-amylase hDGE_amylase

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(2349969..2353307)

AA seq 1112 aa
MNAPATNLTLETVEIDGRDDPLWYRDAVIYQLNVKAFFDSNDDGMGDFKGVAIKLDYVRD
LGVNTIWLMPFYPSPMRDDGYDIAEYEDVHPQYGSLDDFREMLAEAHKRDLRVIIELVMN
HTSSDHPWFQAARRSPPGSPEREFYVWSDSDQLYKDTRIIFTDTETSNWTWDPVAKAFFW
HRFFSHQPDLNFDNPKVLEAIFKTMRFWLDMGVDGFRLDAIPYLVERDGTSNENLPETHA
VIKQLRAAIDAQYKNRFLLAEANMWPEDVREYFGDGDECHMAYHFPLMPRMYMAIAQEDR
HPIIEIMQQTPEIPDGCQWAIFLRNHDELTLEMVTSKERDYMYRMYATDPRARINLGIRR
RLAPLMENDADRIKLMNAMLLSMPGSPIIYYGDEIGMGDNMFVGDRNGVRTPMQWSPDRN
AGFSRADPQRLYLQPIMDPMYGYEALNVEAQARDISSLLNWTKRMLAVRKSSRAFGRGKR
SFLKPGNRKILAYLSTYEDDTILAVFNLSRAAQPVELELSVYKGRVPVEMLGRTSFPPIG
ELPYPLTLPSFGFFWFRLAADAEVPSWHQEHVALQDRPTLVLFDGWTSFFRDRVMPWRIG
MADRMRTQFETDTLPRHIEIQRWYASKGTPIERARLVDHAVWEAGNFSWMLPILKLDGPV
GESTYFMPLALAWEERDEERIANLAPAALAKVRQQANVGIMGDAFYDPAFCRALVQAIGA
DMEIATAAGRLQFKPTTVFKNFTSDIAALTVSRPSTTSSNTVVTLDDTLFLKGYRRLRQG
LNPELEMGRFLTEVVHFPNCVPVLGALEYFMSDGNVMTLALVQGYVANQGDGWDYTSRYV
ERFLEELRISGEANATAGETHGGFLAFAATLGQRTAELHLALTQHTAEPAFDPEPLLSRD
VIAFKDRAAREATATLSLLRERQAQLPAAAQEVAQALLLQQDRLQTRIAAVKTEGKVSIK
TRYHGDYHLGQVLVTGNDFVIIDFEGEPARSFEERRTKSSPLRDVAGMLRSFNYAHWSAL
RRVAQNTAEIDQLEPAVREWERSTREAFLAAYEHVMMSVELAQPVDLDLLALFELEKALY
ELRYELNNRIDWIQVPLQGILALIDPDTGLTR

NT seq 3339 nt +upstreamnt +downstreamnt
atgaatgcacctgcaaccaatctgacgctcgaaactgtcgagattgatggccgcgacgat
ccgctgtggtatcgcgacgcggtcatctaccagctcaacgtcaaagcgttcttcgacagc
aacgacgacggtatgggtgacttcaagggtgtcgcaatcaagctcgactatgtccgggac
ctgggggtcaacaccatctggctgatgcccttctatccctcgccgatgcgcgacgacggc
tacgacattgcggaatatgaagacgttcacccacaatacggctcgctcgacgactttcgt
gaaatgctggccgaggcgcacaagcgcgacttgcgggtgatcatagagctcgtcatgaat
cacacatcaagcgatcacccgtggttccaggcagcgcgacgctcgccaccgggctcgccc
gagcgcgagttctatgtctggagcgatagcgatcagctgtacaaagacacgcgcatcatc
ttcaccgataccgagacctccaactggacctgggacccggtggccaaggccttcttctgg
caccgcttcttcagtcatcagcctgatctgaatttcgacaatcccaaagtgctcgaagca
atcttcaagaccatgcgattctggctcgacatgggcgttgacggtttccgcctcgacgcc
attccctacctcgtcgagcgtgatggcaccagcaacgagaacctgccggagacgcacgcg
gtgatcaaacagctgcgcgcggccatcgacgcgcaatacaagaaccgcttcctgctggct
gaagccaatatgtggcccgaggacgttcgagaatacttcggcgacggcgacgagtgccac
atggcctaccacttcccgctgatgccgcgcatgtacatggccatcgctcaggaagaccgt
cacccgattatcgaaatcatgcagcaaacgccggaaattcccgacggctgccagtgggcc
atctttctgcgcaaccacgatgaactgaccctggaaatggtgaccagcaaggaacgggac
tacatgtaccgcatgtatgcgactgacccgcgggcccggatcaacctgggtattcgccgc
cgcctcgccccgctgatggagaacgacgcggatcgcatcaagctgatgaacgcaatgctg
ctgtcgatgcccggctcgcccatcatctactacggtgacgagatcggcatgggcgacaac
atgttcgtcggcgaccgcaacggcgtgcgtacaccgatgcagtggagccccgaccgcaac
gccggtttctcccgtgccgacccgcaacgcctgtacctgcaacccatcatggatccgatg
tacggttacgaggccctcaacgtcgaggcccaggcgcgcgacatcagctcgctgctcaac
tggaccaaacggatgctcgccgtgcgcaaaagcagccgggccttcggccgcggcaaacgc
agcttcctcaagcctggcaaccgcaagatcctggcgtacctgagcacgtacgaggacgac
accatcctggcagtgttcaatctgtcacgcgcggcgcagccggtggagctggagctgtcg
gtctacaagggccgcgtgccggtcgagatgctgggacgcacctccttcccgccgattggc
gagctgccctatccgctgacgctgccgtcattcggtttcttctggttccggctcgccgcc
gacgctgaagttccgagctggcatcaggagcatgtggcactgcaagaccgcccgacgctg
gtgctgtttgatggctggaccagcttctttcgcgatcgcgtgatgccgtggcgaatcgga
atggccgaccgcatgcgcacgcaattcgaaactgacacgctgccgcgtcatattgagatc
cagcgttggtacgcctccaaaggcacgcccattgaacgcgcacggctggtcgatcatgca
gtgtgggaggccggcaacttcagctggatgctgcccattctgaaactggacggacccgtc
ggggaatcgacctatttcatgccgctggcactggcgtgggaggagcgcgacgaagagcgc
atcgccaacctcgcgcccgctgcgctggccaaggtacgccagcaggccaacgttggcatc
atgggcgatgctttctacgacccggccttctgccgcgccttggtccaggcgatcggcgcc
gacatggaaattgccactgcggccggacgtctgcagttcaaacccacgacggtgttcaaa
aactttacctcagacatcgccgcgctaacggtatcgcgtccgagcacgacgagcagcaac
acggttgtgacactggatgacacgctttttctcaagggttaccgtcgtctgcgccagggc
ctgaatcccgaactggagatgggtcgcttcctgactgaagtcgtacacttcccgaactgc
gttccggtgctgggcgcactcgaatacttcatgagcgatggcaacgtcatgacgctggcc
ctggtccagggttacgtggccaaccaaggggacggctgggactacacatcacgttacgtc
gagcgcttcctggaagagctgcgcatctcgggcgaagccaatgccaccgcaggcgaaaca
catggcggctttctggcttttgccgccacacttggccagcgcactgcggagcttcacctc
gcactgacgcaacacacagcagagccagccttcgaccccgaacctctcttgtcgagagat
gtcatcgcgttcaaggaccgggcggctagagaggccaccgccacattgtcactgctgcgc
gagcgccaggcgcaattgcccgcagccgcccaagaggtagcccaagccctgctgttgcaa
caggaccgcctgcagactcgcatcgccgccgtcaagaccgaggggaaagtcagcatcaaa
acacgctaccacggcgactaccatttgggccaggtcctcgtaaccggcaacgatttcgtg
attatcgacttcgagggtgagccagcccgcagctttgaagaacgccgcaccaagagttca
cctttgcgcgacgtggcgggcatgctgcggtctttcaattatgcacactggtcagcgctg
cggcgcgtggcacaaaatactgccgagattgaccaactggaacccgcagtgcgcgaatgg
gagcgcagcacccgcgaggctttcctggcggcctacgagcacgtcatgatgtcggtcgaa
ttggcgcagccagttgacctggacctgctcgcattgttcgaactggaaaaggcactttac
gaactccgatacgagctcaataatcgcatcgactggatccaggtgcctttgcaaggtatc
ctggccctgattgatcctgatacgggcctgacacgctga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-RFR (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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