KEGG   Rhodoferax ferrireducens: Rfer_2698Help
Entry
Rfer_2698         CDS       T00334                                 

Definition
(GenBank) AMP-dependent synthetase and ligase
  KO
K01895  acetyl-CoA synthetase [EC:6.2.1.1]
Organism
rfr  Rhodoferax ferrireducens
Pathway
rfr00010  Glycolysis / Gluconeogenesis
rfr00620  Pyruvate metabolism
rfr00640  Propanoate metabolism
rfr00680  Methane metabolism
rfr01100  Metabolic pathways
rfr01110  Biosynthesis of secondary metabolites
rfr01120  Microbial metabolism in diverse environments
rfr01130  Biosynthesis of antibiotics
rfr01200  Carbon metabolism
Brite
KEGG Orthology (KO) [BR:rfr00001]
 Metabolism
  Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    Rfer_2698
   00620 Pyruvate metabolism
    Rfer_2698
   00640 Propanoate metabolism
    Rfer_2698
  Energy metabolism
   00680 Methane metabolism
    Rfer_2698
Enzymes [BR:rfr01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.1  acetate---CoA ligase
     Rfer_2698
Lipid biosynthesis proteins [BR:rfr01004]
 Acyl-CoA synthetase
  Short/medium chain acyl-CoA synthetase
   Rfer_2698
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: AMP-binding AMP-binding_C
Motif
Other DBs
NCBI-ProteinID: ABD70414
JGI: Rfer2698
UniProt: Q21UY9
Position
complement(2967759..2969570)
Genome map
AA seq 603 aa AA seqDB search
MRVSQASDKSPASPPQAYTRLHSHFRWQVPEQFNIAQVCCARWAAQPDATKKVAICAYET
GASGQFYTYSELQAQANRLSNVLTALGVGRGDRVAIVMPQCFETAVAYVAVLQMGAVAMP
LSMLFGPQALEFRLHDGEAVVAIGAASALEGLQAVRANCPVLHYVLGVGDLEATDQRADL
NYALALAQEDAHFTPVATLAEEAAVLIYTSGTTGNPKGALIPHRALIGNLTGFVCSQNWF
GFDPAANPASAGLGDLPVGSDAVFWSPADWAWTGGLMDALLPTLYFGRTIVAYNGRFSPQ
TALELMRDCHVTHTFLFPTALKAMMKAYPGSARHTVRQQFKLQLQAIMSAGEAVGDAVFD
YCQQQLGVTVNEMFGQTEINYIVGNCSAQWPPKPGSMGMGYPGHRVAVIDDAGAECPVGV
AGDVALNRFDRHGDADPIFFLGYWKNESSTRAKFTGDWCRTGDLALRDADGYLWYQGRAD
DVFKAAGYRIGPGEIENCLVKHPAVANAAVVPKPDPARGSVVKAYVVLAPDFIAARPLDT
VARAEFDLKLVAQLQAHVKGMLAPYEYPKEIEFIDALPMTSTGKVQRRVLRLQEEQRAQQ
RAG
NT seq 1812 nt NT seq  +upstreamnt  +downstreamnt
atgcgcgtcagtcaagccagcgacaaatcaccggcctcaccaccgcaggcctatacccgg
ctgcacagccacttcaggtggcaggtgcccgagcagttcaacatcgcccaggtttgttgt
gcgcgctgggcggcgcagccagacgctaccaaaaaagtagctatttgcgcttacgagacg
ggggctagcggccagttttatacttattctgaactgcaggcgcaggccaaccgcttgtcc
aacgtgctcacggcattgggggtagggcggggcgaccgggtcgcgattgtgatgccgcag
tgcttcgagaccgccgtggcctacgtggcggtgctgcaaatgggcgcggtggcgatgccg
ttgtcgatgctgtttggcccgcaggcgctggagtttcgcctgcatgacggcgaagccgtg
gtggccattggcgccgccagcgcgctggaaggcttgcaggcggtgcgagccaactgcccg
gtgctgcactacgtgctgggcgtgggcgatctggaggccaccgaccagcgagccgacctc
aattacgcgctggcgctggcgcaggaggacgcgcacttcacgccggtcgccacgctggcc
gaggaggccgccgtgttgatctacaccagcggcaccaccggcaaccccaagggggcgctg
atcccccaccgcgccctgatcgggaacctgaccggttttgtctgcagccaaaactggttt
ggttttgatcccgccgccaacccggccagcgcggggctaggcgatttgcccgtgggctcg
gacgccgtcttctggagcccggccgactgggcctggaccggcggcctgatggatgccctt
ttgcccacgctttactttggccgcacgatcgtggcgtacaacggccgcttcagcccgcaa
acggcgctggagctgatgcgcgactgccatgtgacgcacacgtttttgtttccgaccgca
ctcaaggccatgatgaaggcttatccgggcagcgcgcgccacaccgtgcgccagcagttc
aagctacaactgcaagccatcatgagcgcgggcgaggcggtgggtgacgcggtatttgac
tattgccagcagcaattgggtgtgacggtcaacgagatgtttggccagaccgagatcaac
tacatcgtcggcaattgttctgcccaatggccgcccaagcctggcagcatgggcatgggc
taccccggtcatcgggtggcggtgatagacgatgcgggcgccgagtgcccggtgggtgtg
gccggtgacgtggctttgaaccggtttgaccggcacggtgatgcggacccgattttcttt
ttgggctactggaaaaacgagagttcaacccgtgccaaattcaccggcgactggtgccgc
accggcgatctggcgctgcgtgacgccgacggttacctgtggtaccagggccgtgccgat
gacgtgttcaaggccgccggttaccgcatcggccccggcgagatcgagaactgcctggtc
aagcatccggcggtggccaacgccgccgtggtgcccaagccggacccggcacgcggttca
gtggtcaaggcctatgtcgtgctggctcctgattttatagctgctcgccctttggatacg
gtggctagggccgagtttgatctaaaactcgtggcacagctgcaagcccacgtcaaaggc
atgctggcgccgtacgagtacccgaaagagattgaattcatcgatgccctgcccatgacc
agcaccggcaaggtgcagcggcgggtgttgcggctgcaggaggagcagcgcgcccaacaa
cgggcgggctga

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