KEGG   Rhodoferax ferrireducens: Rfer_2754Help
Entry
Rfer_2754         CDS       T00334                                 

Definition
3-hydroxyacyl-CoA dehydrogenase
Orthology
K01782  
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
Organism
rfr  Rhodoferax ferrireducens
Pathway
Fatty acid degradation
Valine, leucine and isoleucine degradation
Geraniol degradation
Lysine degradation
Tryptophan metabolism
beta-Alanine metabolism
Propanoate metabolism
Butanoate metabolism
Limonene and pinene degradation
Caprolactam degradation
Biosynthesis of unsaturated fatty acids
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Carbon metabolism
Fatty acid metabolism
Module
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:rfr00001]
 Metabolism
  Overview
   01200 Carbon metabolism
    Rfer_2754
   01212 Fatty acid metabolism
    Rfer_2754
  Carbohydrate metabolism
   00640 Propanoate metabolism
    Rfer_2754
   00650 Butanoate metabolism
    Rfer_2754
  Lipid metabolism
   00071 Fatty acid degradation
    Rfer_2754
   01040 Biosynthesis of unsaturated fatty acids
    Rfer_2754
  Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    Rfer_2754
   00310 Lysine degradation
    Rfer_2754
   00380 Tryptophan metabolism
    Rfer_2754
  Metabolism of other amino acids
   00410 beta-Alanine metabolism
    Rfer_2754
  Metabolism of terpenoids and polyketides
   00903 Limonene and pinene degradation
    Rfer_2754
   00281 Geraniol degradation
    Rfer_2754
  Xenobiotics biodegradation and metabolism
   00930 Caprolactam degradation
    Rfer_2754
Enzymes [BR:rfr01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.35  3-hydroxyacyl-CoA dehydrogenase
     Rfer_2754
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.17  enoyl-CoA hydratase
     Rfer_2754
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.2  Acting on hydroxy acids and derivatives
    5.1.2.3  3-hydroxybutyryl-CoA epimerase
     Rfer_2754
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
3040935..3043094
Genome map
AA seq 719 aa AA seqDB search
MKTIQYELQDGVATITFNEPNSPVNTMCLQWQQDMSALVAQVLKDQDAIKGIILTSAKST
FFAGADLKGAMRLRPSDAGAIFTEIELVKKNFRTLETLGKPVVSCLNGTALGGGWEVALV
GHYRIAVDDRKTQFGLPEVTLGLLPGASGVTKMTRHLGLMGAQPYLVEGKTFSPKEAKSL
GLVHELVAPGDTAATEMRTKALAWIAANPSAQHPWEAKGYKVPGGLPSSPAVAQMLVVAP
AMIKQQTRGLYPAPEAIMACMVEGLQVDIPTALRIESRYLAKLMTGINARAMINTFFFNL
NAIKSGQSRPSQSPRFKPAKVGLLGAGMMGAGIAFAQASKGIATVLKDVSQEKADLGKSY
SARITQARVDKGRMSATDQQTILERIHATDQVADLAGCDLIIEAVFENRELKAKVTQEAE
PMLAPGGFFASNTSTLPISGLAKASAAADKFIGIHFFSPVDKMKLVEIIRGRQTSEDTVA
RAYDYVQAIGKMPIVVNDSRGFFTSRVFGTFVMEGVAMLGEGIPAAAIENAGIQCGMPVG
PLAVLDETSLTLSLHVMEQTRADFEAEGKTYVASPGEALLVNLVKEHQRPGRAGGAGFYE
YPAERGVKKFLWPQLKPLFEKADVQWDITDLKDRLLYRQAVETARCLSENVLTSVHDANI
GSIFGIGFPAWTGGAMQFIYGMGMDAFVTRADALAARFGAGFALTDEVKAAITRYQPVY
NT seq 2160 nt NT seq  +upstreamnt  +downstreamnt
atgaaaaccatccaatacgaattacaagacggcgttgccaccatcacctttaacgaaccc
aattcccccgtcaacaccatgtgcctgcaatggcagcaagacatgtcggccctcgttgcg
caggttctgaaggaccaggacgccatcaaaggcatcatcctgacatcggccaaatccact
ttttttgccggggctgacctgaagggcgcgatgcgcctgcggccgtccgacgcgggcgcc
atcttcaccgagatcgagctggtcaagaagaatttccgcaccctggagaccttgggcaaa
ccggtggtgagctgcctcaacggcacggccttgggcggcggctgggaagtggccctggtc
ggccactaccgcattgccgttgacgatcgcaaaacccagttcggcttgcccgaagtgacg
ctgggcttgttgcctggcgccagtggcgtcaccaagatgacgcgccacctcggtttgatg
ggtgcacaaccctacttggtggaaggcaagactttctcgcccaaggaagcaaaaagtctg
ggactggtgcatgagctggtcgcaccgggcgacacagccgccaccgagatgcgcaccaag
gcactggcctggattgccgccaaccccagcgcccagcacccctgggaagccaaaggctac
aaggtgcccggcggcctgccctccagcccggctgtagcccaaatgctggtggtggctccc
gccatgatcaagcagcaaacgcgcggcctgtacccggcaccggaggccatcatggcgtgc
atggtggaagggctgcaagtcgatatcccgaccgcactgcgcatcgagagccgctacttg
gccaagctcatgaccggcatcaacgcccgcgccatgatcaatacctttttcttcaacctg
aacgccatcaagagcggccagtcgcgaccttctcagtccccgcgcttcaaaccggccaag
gtgggtttgctgggtgccgggatgatgggtgcgggcattgccttcgcccaggccagcaaa
ggcatcgccaccgtgctcaaggatgtgagtcaagaaaaagccgatctgggcaagtcttac
agcgcccggatcacccaggcgcgcgtggacaaaggccgcatgagcgcaaccgaccagcaa
accattcttgagcgcattcacgccaccgaccaagtggcggatctggcgggttgtgacctg
atcatcgaggcggtgtttgaaaaccgggagctcaaggccaaggtcacccaagaagccgag
cccatgctggcgcccggtggcttctttgcgtcgaacacctccacgctgcccatcagcggc
ctggccaaggccagtgcggctgcagacaaatttatcggcattcatttcttcagcccggtg
gacaagatgaagctggtcgaaatcattcgtggccggcaaaccagtgaagacacagtggcg
cgggcttatgactacgtgcaggccatcggcaaaatgcccattgtggtgaacgattcgcgt
ggcttctttaccagccgtgtgtttggcacctttgtcatggaaggcgtggccatgctgggt
gaaggcattccggcggcagccatcgaaaatgcgggcattcagtgtggcatgccggtcgga
ccgctggcggttttggatgaaacctcactgacgctgagtctgcatgtgatggagcaaacc
cgcgccgacttcgaagccgagggcaagacttatgtggccagcccaggcgaggcgctgctg
gtcaacctggtgaaggagcaccagcggcccggccgcgcggggggcgccggcttctacgaa
taccccgctgagagaggcgtcaaaaaattcctctggccgcaactcaaaccgctgtttgaa
aaagccgatgttcagtgggacatcaccgacctgaaagaccgcctgctttatcgtcaggcg
gtggagacggcgcgctgtttgagcgaaaacgtgctcaccagcgtacatgacgccaacatc
ggctccatcttcggcattgggttcccggcctggaccggtggtgccatgcagttcatctat
ggcatggggatggacgcctttgtgacgcgggcagacgcgctggcagcccggttcggggcc
ggttttgcgctgacggacgaagtcaaggcagcaatcacacgctaccagcctgtttattga

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