KEGG   Rubrivivax gelatinosus: RGE_12540Help
Entry
RGE_12540         CDS       T01803                                 

Gene name
trpB
Definition
tryptophan synthase subunit beta TrpB (EC:4.2.1.20)
Orthology
K01696  
tryptophan synthase beta chain [EC:4.2.1.20]
Organism
rge  Rubrivivax gelatinosus
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:rge00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    RGE_12540 (trpB)
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RGE_12540 (trpB)
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    RGE_12540 (trpB)
Enzymes [BR:rge01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     RGE_12540 (trpB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
1306523..1307770
Genome map
AA seq 415 aa AA seqDB search
MLNYDQPDARGHFGPYGGSFVAETLTHALHELQDAYARYREDPEFVAEYRYELKHFVGRP
SPIYHAARTSRELGGAQIYLKREDLNHTGAHKINNVIGQALLARRMGKPRVIAETGAGQH
GVATATICARYGLECVVYMGSEDVKRQSPNVYRMHLLGAKVVPVESGSKTLKDALNEALR
DWVTNVENTFYIIGTVAGPAPYPAMVRDFQRIIGDECLEQMPELAGRQPDAVIACVGGGS
NAMGIFYPYIRHEATRLIGVEAAGQGLETGKHAASLSAGSPGVLHGNRTYLLQDDNGQIT
ETHSISAGLDYPGVGPEHAYLKDIGRAEYVGITDDEALKAFHHLCRTEGIIPALESSHAL
AHAMKIAPTMRPDQILLVNLSGRGDKDIGTVADLSGADFYCRPSCRGQTVKGGQQ
NT seq 1248 nt NT seq  +upstreamnt  +downstreamnt
atgctgaattacgaccagcccgatgcccgcgggcatttcgggccttatggcggcagtttc
gtcgccgaaaccctgacccacgcgctgcacgaactgcaggacgcctacgcccgctaccgc
gaggaccccgagttcgtggccgagtatcgctacgagctgaagcacttcgtcggccgcccg
agcccgatctaccacgccgcgcgcaccagccgcgaactcggcggcgcgcagatctacctg
aagcgcgaggacttgaaccacaccggcgcgcacaagatcaacaacgtcatcggccaggcg
ctgctcgccaggcgcatgggcaagccgcgcgtgatcgccgagaccggcgccggccagcac
ggcgtcgccacggcgacgatctgcgcgcgctacggcctggagtgcgtggtctacatgggc
agcgaggacgtcaagcgccagagccccaacgtctaccgcatgcatctgctcggcgccaag
gtcgtgccggtggaaagcggcagcaagacgctgaaggacgcgctcaacgaggcgctgcgc
gactgggtcaccaacgtcgagaacaccttctacatcatcggcacggtggccggcccggcg
ccgtacccggcgatggtgcgcgacttccagcgcatcatcggcgacgagtgcctggagcag
atgcccgaactcgccggccgccagcccgacgcggtgatcgcctgcgtcggcggcggcagc
aacgcgatgggcatcttctacccgtacatccgccacgaagccacgcggctgatcggcgtc
gaggccgcggggcagggcctggagaccggcaaacacgccgcgtcgctgtcggccggctcg
cccggcgtgctgcacggcaaccgcacctatctgctgcaggacgacaacggccagatcacc
gagacgcactcgatctcggccggcctcgactaccccggcgtcggccccgagcacgcgtat
ctgaaggacatcggccgtgccgagtacgtcggcatcaccgacgacgaggcgctgaaggcc
ttccaccacctctgccgcaccgagggcatcatcccggcgctggagtccagccacgcactg
gcccacgcgatgaagatcgcgccgacgatgcgccccgaccagatcctgctggtcaacctc
tccggccgcggcgacaaggacatcggcaccgtcgccgacctgtccggtgccgacttctat
tgccgcccctcgtgccgcggccagacggtgaaggggggccagcaatga

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