KEGG   Rubrivivax gelatinosus: RGE_18670
Entry
RGE_18670         CDS       T01803                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III epsilon subunit DnaQ
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
rge  Rubrivivax gelatinosus
Pathway
rge03030  DNA replication
rge03430  Mismatch repair
rge03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rge00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RGE_18670 (dnaQ)
   03430 Mismatch repair
    RGE_18670 (dnaQ)
   03440 Homologous recombination
    RGE_18670 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rge03032]
    RGE_18670 (dnaQ)
   03400 DNA repair and recombination proteins [BR:rge03400]
    RGE_18670 (dnaQ)
Enzymes [BR:rge01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RGE_18670 (dnaQ)
DNA replication proteins [BR:rge03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     RGE_18670 (dnaQ)
DNA repair and recombination proteins [BR:rge03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     RGE_18670 (dnaQ)
SSDB
Motif
Pfam: RNase_T RNase_H_2
Other DBs
NCBI-ProteinID: BAL95208
UniProt: I0HQC1
Position
1952254..1952958
AA seq 234 aa
MRQIFLDTETTGLSAVDGDRLVEVGCIEMLNRRLSGRTLHHYLNPERSSNPEAVKVHGLT
DEFLADKPLFAAVADEFIEFVRDAELIIHNAAFDVGFLDAELTRLGKPRLAELGCTITDS
LLMARELFPGKANSLDALCKRLEVDNSNRALHGALLDAGLLAEVYIRMTRGQDSLVIDVV
EEGGSALEVAAIDLSQFTLPVLAASEQEAAAHEAVLAELDKSSNGRTIWRQVMA
NT seq 705 nt   +upstreamnt  +downstreamnt
atgagacagatcttcctcgacaccgaaaccaccggcctgtcggccgtcgacggtgaccgt
ctggtcgaagtcggctgcatcgagatgctgaaccggcgcctgtcgggccgcacgctgcac
cactacctgaacccggagcgctccagcaatccggaggcggtcaaggtgcacggcctgacc
gacgagttcctcgccgacaagccgctgttcgccgccgtcgccgacgagttcatcgagttc
gtgcgtgacgccgagctgatcatccacaacgccgcgttcgacgtcggcttcctcgacgcc
gaactgacgcgcctgggcaaaccgcgtttggccgaactgggctgcacgatcaccgacagc
ctgctgatggcgcgcgagctgttccccggcaaggcgaactcgctggacgcgctgtgcaag
cggctggaggtcgacaacagcaaccgcgcgctgcacggcgcgctgctcgacgcggggctg
ctggccgaggtctacatccgcatgacgcggggccaggactcgctggtcatcgacgtcgtc
gaagaaggcggctcggcgctcgaagtggcggccatcgacctgtcgcagttcacgctgccg
gtgctcgccgcgagcgagcaggaggcggccgcgcacgaggccgttctggccgaactcgac
aaatcgagcaacgggcgcaccatttggcgccaagtcatggcataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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