KEGG   Rubrivivax gelatinosus: RGE_18800
Entry
RGE_18800         CDS       T01803                                 
Symbol
cobB
Name
(GenBank) cobyrinic acid A,C-diamide synthase CobB
  KO
K02224  cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
Organism
rge  Rubrivivax gelatinosus
Pathway
rge00860  Porphyrin metabolism
rge01100  Metabolic pathways
rge01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:rge00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    RGE_18800 (cobB)
Enzymes [BR:rge01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.9  hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing)
     RGE_18800 (cobB)
    6.3.5.11  cobyrinate a,c-diamide synthase
     RGE_18800 (cobB)
SSDB
Motif
Pfam: GATase_3 CbiA AAA_26
Other DBs
NCBI-ProteinID: BAL95221
UniProt: I0HQD4
Position
1962814..1964139
AA seq 441 aa
MIPPGLLVAAPASGCGKTTVTLGLLAAWRAAGLAVQPFKNGPDYIDPAFHSAAAGRASFN
LDSWAMGRERVAGLLGAAEGCDLLLAEASVGLFDGAVTPGEWGRGAGADLAEAFGWPVLL
VLDVRGQAQSAAAVTLGFASLRPGLKLAGVLLNRVGSARHEATVRSAVEAAGFRVFGALP
RDAAVALPERHLGLVQAEELPERAATLAALGRLVAEHVDLDALRAAAAGACEPKPALPLP
PPGARIALARDAAFSFVYPHLLDAWHAAGAALLPFSPLADEAPDDSADACWLPGGYPELH
AGRLAAATRWRDGLRAFARTRPVHGECGGYMALGAMLEDADGSRHAMAGLLGLETSFRKR
RLHLGYRLAELQVPLPGYAAGTRLRGHEFHYASVLAQPDAPLARIVDADGREVAETGSWR
ALDGGGRVSGSFFHLVAPAAG
NT seq 1326 nt   +upstreamnt  +downstreamnt
atgatcccgcccgggctgctggtcgcggcgcccgcctcgggctgcggcaagacgacggtg
acgctgggcctgctggccgcctggcgcgctgccgggctggccgtgcagccgttcaagaac
ggccccgactacatcgacccggccttccactcggcggctgccggccgcgcttcgttcaac
ctggacagctgggcgatgggccgcgagcgggtcgccggcctgctgggcgcggccgagggc
tgcgacctgctgctggccgaagcctcggtgggcctgttcgacggcgccgtgacacccggc
gaatggggccgcggcgccggcgccgacctggccgaagccttcggctggccggtgctgctg
gtgctggacgtgcgtggccaggcgcagtcggccgccgcggtgacgctgggcttcgccagt
ctgcgcccgggcctgaagctcgccggcgtgctgctgaaccgcgtcggcagcgcgcgccac
gaggcgaccgtgcgcagcgcggtcgaggccgcgggcttccgcgtcttcggtgcgctgccg
cgcgacgccgccgtggccttgcccgaacgccacctgggcctggtgcaggccgaggaactg
cccgaacgcgccgcgacgctggccgcgctgggccggctggtcgccgaacacgttgacctg
gacgcgctgcgtgctgccgccgcgggtgcctgcgagcccaagccggcgttgccgctgcca
ccgccgggcgcgcgcatcgcgctggcgcgcgacgccgccttctccttcgtctacccgcat
ttgctggacgcctggcacgccgccggcgcggcgctgctgccgttctcgccgctggccgac
gaagcgcccgacgacagcgccgacgcctgctggctgcccggcggctaccccgagctgcac
gccggccgcctggccgccgccacacgctggcgcgacggcctgcgcgccttcgcgcgcacg
cggccggtgcacggcgaatgcggcggctacatggcgctgggcgcaatgctggaagacgcc
gacggcagccgccacgcgatggccgggctgctgggtctggaaacctcgttccgcaaacgc
cgcctgcacctgggctaccgcctcgccgagctgcaggtgccgctgcccggttatgccgcc
ggcacgcggctgcgtggccacgagttccactacgccagcgtgctcgcccagcccgacgcg
ccgctggcgcgcatcgtcgacgccgacggccgcgaggtcgccgagaccggctcgtggcgg
gcgctggacggcggcgggcgggtgagcggcagcttttttcatctcgtggcgccggctgcg
ggctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (3)   
   KEGG MODULE (2)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (40)   

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