KEGG   Rubrivivax gelatinosus: RGE_24030Help
Entry
RGE_24030         CDS       T01803                                 

Gene name
dapE
Definition
succinyl-diaminopimelate desuccinylase (EC:3.5.1.18)
Orthology
K01439  
succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Organism
rge  Rubrivivax gelatinosus
Pathway
Lysine biosynthesis
Metabolic pathways
Microbial metabolism in diverse environments
Biosynthesis of amino acids
Module
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:rge00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    RGE_24030 (dapE)
  Amino acid metabolism
   00300 Lysine biosynthesis
    RGE_24030 (dapE)
Enzymes [BR:rge01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.18  succinyl-diaminopimelate desuccinylase
     RGE_24030 (dapE)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(2530288..2531433)
Genome map
AA seq 381 aa AA seqDB search
MNDALRLAEQLIARRSVNPDDAGCQALIASRLAALGFECETLVCGPENFRVTNLLARRTG
GLPGPVLAFAGHTDVVPTGPLERWTSDPFVPSHRDGRLYGRGAADMKSSLAAMVVAVEEF
VAAQPRHAGAIAFLLTSDEEGPSVDGTVRLVELLQQRGERLDACIVGEPTSVSRLGDMVK
NGRRGSLSGRLTVIGKQGHIAYPQLAKNPIHVFAPALAELAAMRWDEGNAFFPPTSWQVS
NLHGGTGASNVIPGELVVDFNFRFSTESTPESLQARVAEVLARHGVEHRLEWTLSGRPFL
TTPGPLIAALGAAITAECGVEPELSTTGGTSDGRFIAAICPQVVEFGPLNATIHQIDEHV
DAASVETLKNVYRGTLKNFFP
NT seq 1146 nt NT seq  +upstreamnt  +downstreamnt
atgaacgacgcgctgcgcctggccgagcagctgatcgctcggcgctcggtcaaccccgac
gacgccggctgccaggcactgatcgcctcgcgcctggcggcgctgggcttcgagtgcgag
acgctggtctgcggcccggagaacttccgcgtcaccaaccttctggcgcgccgcaccggc
ggcctgccgggcccggtgctggccttcgccggccacaccgacgtcgtgccgaccggcccg
ctggagcgctggacgagcgaccccttcgtgcccagccaccgcgacggccggctctacggc
cgcggcgccgccgacatgaagagctcgctggcggcgatggtcgtcgccgtcgaggagttc
gtcgccgcgcagccgcgccacgccggcgcgatcgccttcctgctgaccagcgacgaagag
ggcccgtcggtcgacggcaccgtgcgcctggtggagctgctgcaacagcgcggcgaacgc
ctggacgcctgcatcgtcggcgagccgacttcggtctcgcgcctgggcgacatggtcaag
aacggccgccgcggctcgctgtcgggccggctgacggtcatcggcaagcagggccacatc
gcctacccgcagctggcgaagaacccgatccacgtcttcgcgccggcgctggccgagctg
gcggcgatgcgctgggacgagggcaacgccttcttcccgccgacgagctggcaggtcagc
aacctgcacggcggcaccggggcgagcaacgtcatcccgggcgaactggtcgtcgacttc
aacttccgcttcagcaccgagtcgacgcccgagtcgctgcaggctcgggtcgccgaagtg
ctggcgcgccacggcgtcgagcaccggctggagtggacgctctccggccgccccttcctg
acgacacccggcccgctgatcgccgcgctgggcgcggccatcacagccgaatgcggcgtc
gagcccgagctcagcaccaccggcggcacctccgatgggcgtttcatcgccgcgatctgc
ccgcaggtcgtcgagttcgggccgctcaacgccaccatccaccagatcgacgaacacgtc
gacgcggcctcggtcgagacgctgaagaacgtctaccgcggcacgctgaaaaacttcttt
ccatga

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