KEGG   Rubrivivax gelatinosus: RGE_37540Help
Entry
RGE_37540         CDS       T01803                                 

Gene name
recD
Definition
exodeoxyribonuclease V alpha chain RecD (EC:3.1.11.5)
Orthology
K03581  
exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
rge  Rubrivivax gelatinosus
Pathway
Homologous recombination
Brite
KEGG Orthology (KO) [BR:rge00001]
 Genetic Information Processing
  Replication and repair
   03440 Homologous recombination
    RGE_37540 (recD)
Enzymes [BR:rge01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     RGE_37540 (recD)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
4010535..4012553
Genome map
AA seq 672 aa AA seqDB search
MSRRRPRDESTLPLFADEPAPPPVVAPPPEPAPDAGWVEDLPADALPDLDVFFDEDGGVI
DVVPEPETPETADETPARPETPAEALAAGLAAHVEAWSRRLGAEADDAHAAGRAAEALSR
ATAAGHVCLMLDELDGEPGDWRARLEASCVVGPAHAPGAAPLVLDADGRLYLQRDFDHER
RLAARLKAAARPVPGALDAGARARLAELFAANTSTEEAPDWQRAAAALALRQRLAVISGG
PGTGKTTTVVALLACLLADDPEARIALAAPTGKAAARMTEAIRGRAAQLPEAIRARLPQE
ASTVHRLLRAGPDGFFHGAERPLAIDALVVDEASMLDLALARRLLDAVPAHARIVLLGDK
DQLAAVESGAVFAELSADTTLTPGCRAELAAACGVSPQALRPPPAAAPALADSVVWFRRT
FRFAADSGIGRLATLVNGGRADEALAWLGAGGDASVQWLDDRGAEPGAAVRNAIAAGFAP
YVDALRRDPQDAAAAMRAFDGFRVLCATRDGARGVAGVNALAAAQLRRALGAAPGAWYPG
RPVMVRRNDYVLRLFNGDIGLALPDAQGRLEVVFPAPGGGWRRVAPARLPPHDTAFGMTV
HQSQGSEFTDLLLLMPDRPLRALTRELLYTGITRARQRVTLAGPAAALSAAVRSPTRRRS
GLAARLHELDIP
NT seq 2019 nt NT seq  +upstreamnt  +downstreamnt
atgagccgccgccgcccccgcgacgagagcacgctgccgctgttcgccgacgaaccggcg
ccgccgccggtcgtggccccgccgcccgaaccggcgcccgacgccggctgggtcgaagac
ctgcccgccgacgccctgcccgacctcgacgtcttcttcgacgaagacggcggcgtgatc
gacgtcgtgccggagcccgagacgcccgaaacggcggacgagacgccggcccgccccgaa
acaccggccgaagcgctggccgccgggttggcagcacacgtcgaggcctggtcgcgccgc
ctcggcgccgaggccgacgatgcccacgccgccggccgcgccgccgaagcgctgtcgcgt
gccaccgcggccggccacgtctgcctgatgctggacgaactcgacggcgagcccggcgac
tggcgcgcccggctcgaagcttcgtgtgtcgtcggcccggcgcacgcgcccggcgccgcg
ccgctggtgctcgacgccgacggccggctctacctgcagcgcgacttcgaccacgagcgc
cgcctcgccgcacggctgaaggccgcggcgcggccggtgcccggcgcgctggacgccggc
gcgcgtgcgcggctggccgaactcttcgccgccaacaccagcacggaggaggcgcccgac
tggcagcgggccgccgccgcgctggcgctgcgccagcgtctggcggtcatcagcggcggc
ccgggcaccggcaagacgacgaccgtcgtcgcgctgctggcctgcctgctggccgacgac
cccgaggcacgcatcgcgctggccgcgcccaccggcaaggccgcggcgcgcatgaccgag
gcgatccgagggcgcgccgcgcagctccccgaggcgatccgcgcgcggctgccgcaggaa
gcgagcaccgtgcaccggctgctgcgcgccggccccgacggcttcttccacggcgccgag
cgtccgctggcgatcgacgcgctggtcgtcgacgaagcctcgatgctggacctggcgctg
gcgcgccggctgctcgacgcggtgccggcgcacgcgcgcatcgtgctgctcggcgacaag
gaccagctcgccgcggtcgagagcggcgcggtcttcgccgaactgagcgccgacacgacg
ctgacgcccggctgccgggccgagctcgccgcggcttgcggcgtcagcccccaggcgctg
cggccgccgccggccgccgcgccggcgctcgccgacagcgtggtctggttccgccgcacc
ttccgtttcgccgccgactcgggcatcggccggctggccacgctggtcaacggcggccgc
gccgacgaggcgctggcctggctgggcgccggcggcgacgcttcggtgcagtggctggac
gaccgcggcgccgaacccggcgcggcggtgcgcaacgcaatcgccgccggcttcgcgccc
tacgtcgacgcgctgcgccgcgacccgcaggacgccgccgcggcgatgcgcgccttcgat
ggctttcgtgtgctctgcgcgacacgcgacggcgcacgcggtgtcgccggcgtcaacgcg
ctggccgcggcccagctgcgccgcgcgctcggcgccgcacccggcgcctggtacccgggc
cggccggtgatggtgcgccgcaacgactacgtgctgcggctgttcaacggcgacatcggc
ctggcgctgcccgacgcccagggccggctggaagtcgtgttcccggcgcccggcggcggc
tggcgccgcgtcgcgccggcgcggctgccgccgcacgacacggcgttcggcatgacggtg
caccagtcgcaaggctcggagttcaccgacctgctgctgctgatgcccgatcgcccgctg
cgcgcgctgacgcgcgaactgctctacaccggcatcacacgcgcccgccagcgtgtcacg
ctggccggcccggccgcggcgctgtcggccgcggtgcgttcgccgacgcggcgccgctcg
ggcctggccgcccgcctgcacgaactcgacatcccatga

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