KEGG T00382: RHA1

Rhodococcus jostii RHA1: RHA1_ro00237

Entry

RHA1_ro00237 CDS T00382

Definition

DNA ligase (ATP), C-terminal

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

rha Rhodococcus jostii RHA1

Pathway

rha03410	Base excision repair
rha03420	Nucleotide excision repair
rha03430	Mismatch repair
rha03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:rha03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:rha03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:rha03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:rha03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_C DNA_ligase_OB_2

Other DBs

NCBI-GI:

111017259

NCBI-GeneID:

4217754

UniProt:

Q0SK63

Position

309577..310521

AA seq 314 aa
MLATLGSPPGGDDWAVEMKFDGVRAVATITPAAVHLFSRDNADITAAYPEIAAGLSEINP
GRGVIVDGEIVAPAAGSGRPRFDLLRQRTPIQDPPPALQRAVPVAFCIFDLLVHRGAPIL
QWPYLERRQLLADLNLDLEGEALRVPPHWVDVAGEDMLRLADEHGLEGIVAKRMTSPYRP
GRRSPDWVKTPLRNSAEVIVGGWEATSRGGLRSLIVGAHADQVGLIFVGHVGSGFTESHR
RRTLMLLRPLERPSSPFDDHVPDELAAHARWVEPILVGTVEYREFTLDRRLRHPSWKGFR
AGIDPRWVTVEELP

NT seq 945 nt +upstreamnt +downstreamnt
atgctggcgacgctcggctcaccaccgggtggagacgactgggcggtggagatgaaattc
gacggtgtacgcgccgtcgccaccatcaccccggccgcggtgcacctgttcagccgcgac
aacgccgacatcaccgctgcatacccggagatcgccgccggactctccgagatcaaccca
ggccgaggcgtaatagtcgatggtgagatcgtcgcgcccgcagccggcagcggccgaccg
cgcttcgacctgctccgacagcggacccccatccaggatccaccgcccgcgctgcagcgc
gccgtaccggtcgccttttgcatcttcgatctgctggtgcaccgcggggcgccgatcctg
cagtggccgtacctcgagcgccgacaactcctggccgacctgaacctcgatctggagggt
gaggctctacgggtacctccacactgggtcgatgtcgccggcgaggacatgctccggtta
gccgacgagcacggtctcgaaggaattgtcgccaagagaatgacctcgccctatcggccc
ggacgccgctcaccagattgggtcaaaactccgctacgcaacagcgccgaggtgatcgtc
ggtgggtgggaagcgaccagccgcggcggtctgcggtcgctgatcgtcggtgcccacgcg
gaccaggtcggcttgatattcgtcgggcacgtcggttccggcttcaccgaatcccaccgg
cgccgaacgctcatgctgctccggccactcgagcgcccttccagtcccttcgacgatcat
gttcccgatgagcttgccgctcacgcccgctgggtggaaccgattctggtcggcaccgtc
gagtaccgggagttcaccctggaccggcggctccgccacccgtcgtggaagggattccgc
gcggggatagacccgagatgggtgaccgtcgaggagttaccgtag

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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