KEGG   Rhodococcus jostii: RHA1_ro02246Help
Entry
RHA1_ro02246      CDS       T00382                                 

Definition
DNA-formamidopyrimidine glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
rha  Rhodococcus jostii
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:rha00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    RHA1_ro02246
Enzymes [BR:rha01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     RHA1_ro02246
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     RHA1_ro02246
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(2378451..2379317)
Genome map
AA seq 288 aa AA seqDB search
MPELPEVEALAEFLREHAVGAVVGRVDVAALSVLKTFDPPITGLQGRDVTGAARFGKHLA
LDCSGLWLVTHLSRGGWLRWTDNPSAAPPKPGKGPLALRVHFFTPEGATPAFDLTEAGTK
KRLAVWVVHDPQEVEGIARLGPDALAVTEPEFAALLSTTSARIKNALVDQSLLAGVGNAY
SDEILHTAKISPFATSRTLPEDQVHVLYDAMRSVLSDAVQRSLGQDAARLKGEKRSGMRV
HARTGLPCPVCGDTIREVSFAEKSFQYCATCQTGGKVLADRRMSRLLK
NT seq 867 nt NT seq  +upstreamnt  +downstreamnt
atgcccgagctgcccgaggtggaggcgttagccgagttcctgcgtgaacatgccgtggga
gcggtcgtcggccgagtggacgtggcggccctgagcgtgctcaagacgttcgaccccccg
atcaccggcctgcagggccgcgacgtgacgggtgcggcccggttcggcaagcacctcgcg
ctcgactgttccgggttgtggctcgtcacccacctctcgcgtgggggctggttgcgctgg
accgacaacccgtcggcggcgccgccgaaaccggggaagggtccgctggcgctgcgggtg
cacttcttcaccccggagggcgcgacgccggcgttcgacctcaccgaggcaggcaccaag
aaacggctcgcggtgtgggtggtgcacgacccgcaggaggtggaggggattgcccggctc
ggacccgacgccctcgccgtcaccgaacccgagttcgccgcactgctgtccaccacgtcg
gcgcgtatcaagaatgcgctcgtcgaccagtcgctgctcgccggcgtcggtaacgcgtac
tccgatgaaatcctgcacaccgcaaagatttccccgttcgccacgtcgcgcaccctgccg
gaagaccaggtgcacgtgctgtacgacgcgatgcggtccgtgttgagcgacgccgtccag
aggtcgctcggccaggacgcggcgcggctgaagggggagaagcgatccgggatgcgggtg
cacgcccggaccggcctcccctgtcccgtctgcggcgacaccatccgggaagtgtcgttc
gcggagaagtcttttcagtactgcgcgacgtgtcagaccggaggcaaggtgctcgccgac
cgccggatgtcgcgactgctgaagtag

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