KEGG   Rhodococcus jostii RHA1: RHA1_ro05108Help
Entry
RHA1_ro05108      CDS       T00382                                 
Definition
DNA ligase (ATP), N-terminal
Orthology
K01971  
DNA ligase (ATP) [EC:6.5.1.1]
Organism
rha  Rhodococcus jostii RHA1
Pathway
Base excision repair
Nucleotide excision repair
Mismatch repair
Non-homologous end-joining
Class
Genetic Information Processing; Replication and repair; Base excision repair [PATH:rha03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:rha03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:rha03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:rha03450]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
5444397..5445425
Genome map
AA seq 342 aa AA seqDB search
MASPAEELDVDGVAVRLSNPDKIYYPKLGAEGGTKRHLVEYYRTVALDGALLTALFDRPT
HLQRFPDGIEGEEIYQKRVPAKRPDHVESCEVTFPSGRKADVLRVRSAANIVWAANLGNI
TFHPWAVRCPDVDHPDELRIDLDPQPGTGFDDARAVALDVLRPLLDELGLVGYPKTSGGR
GLHVYLRIEPRWDFIEVRRAGIALAREIERRSGDRATTSWWKEERGERIFLDFNQNARDK
TIASAYSARKTPIATVSTPVTWEELVDVDPDDFTIATVPALLAKRGDPMGTMGDVAQSLD
VLLEMAERDAANGLGDLPYPPNYPKMPGEPKRVQPSRDRDRK
NT seq 1029 nt NT seq  +upstreamnt  +downstreamnt
atggcgagtcctgccgaagaactcgacgtcgacggcgtcgccgtgcggctgtcgaacccc
gacaagatctactacccgaaactcggtgccgagggcggcacgaaacggcacctggtggag
tactaccggaccgtggcactcgacggtgcgctgctgaccgccctgttcgatcggccgacg
catctgcaacggttcccggacgggatcgagggcgaggagatctaccagaagcgggttccc
gcgaagcgccccgaccacgtggagtcgtgcgaggtcacgttcccgtccggccgcaaggcg
gatgtgctccgcgtgcgcagtgccgcgaacatcgtgtgggcggcgaacctcggcaacatc
acgttccatccgtgggcggtccggtgccccgacgtcgatcaccccgacgaactgcgcatc
gacctggacccgcagccgggaaccggattcgacgacgcccgggcggtcgcgctggacgtg
ctccggccgctgctcgacgaactcggtctcgtcggctaccccaagacgtcgggcggccgc
gggctgcacgtgtatctccgcatcgaaccgcgctgggatttcatcgaggtgcggcgcgcg
ggcatcgccctcgcccgggagatcgagcggcgcagcggcgaccgggccaccacgtcctgg
tggaaggaggaacgcggcgaacgcatcttcctcgacttcaaccagaacgccagggacaag
accatcgcgtccgcctactcggcccgcaagacgccgatcgcgaccgtgtcgacgcccgtc
acctgggaggaactggtggacgtcgaccccgacgacttcaccatcgcgaccgtgcccgcg
ctgctcgcgaagcgcggcgatcccatggggaccatgggtgacgtggcgcaatcgctcgac
gtgctgctggagatggccgaacgggacgccgcgaacggtctcggagatctgccgtaccca
cccaactacccgaaaatgccgggggaacccaagcgggtacaaccgagtcgggaccgagac
cgcaaatag
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