KEGG   Rhodococcus sp. B7740: NY08_3681
Entry
NY08_3681         CDS       T03776                                 
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
rhb  Rhodococcus sp. B7740
Brite
KEGG Orthology (KO) [BR:rhb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rhb03032]
    NY08_3681
   03400 DNA repair and recombination proteins [BR:rhb03400]
    NY08_3681
Enzymes [BR:rhb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     NY08_3681
DNA replication proteins [BR:rhb03032]
 Prokaryotic type
  DNA Topoisomerases
   NY08_3681
DNA repair and recombination proteins [BR:rhb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      NY08_3681
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim HATPase_c_3
Other DBs
NCBI-ProteinID: AJW41691
UniProt: A0A0D5AFS3
Position
3788253..3790295
AA seq 680 aa
MAAQKSGINDNSKDYGASSITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEA
MAGYASTVDVTIHEDGSVEVKDDGRGIPVAMHASGVPTVEVVMTQLHAGGKFDSDSYAVS
GGLHGVGISVVNALSTKVELQIARDGHRYKQTYDYAKPSPLETVGDTDETGTTVRFWADG
KIFETLDYSFETVHRRLQEMAFLNKGLTINFTDERVAATDATEEELGETAEAPKTAEEEQ
ADAAVAKPAKVRKRTYHYPDGLVDFVKHINRTKTAIHNSVVGFTGKGEGHEVEIAMQWNA
GYSESVHTFANTINTHEGGTHEEGFRTALTSTVNKYALEKKLVKEKDVKLTGDDIREGLA
AVISVRVGEPQFEGQTKTKLGNTEIRSFVQKACNEHLAHWFESNPADAKTIINKAVSSAQ
ARMAARKARELVRRKSATDIGGLPGKLADCRSNDPSKSEIYIVEGDSAGGSAKSGRDSMF
QAILPLRGKIINVEKARIDRVLKNNEVQSIITAFGTGIHDEFDITKLRYHKIVLMADADV
DGQHISTLLMTLLFRFMRPLIEHGHVYLAMPPLYKLKWSRGEPDFAYSDRERDGLLEAGI
ANKRKINVEDGVQRYKGLGEMNAKELWETTMDPSVRVLRLVTLDDAAAADELFSVLMGED
VSARRSFIARNAKDVRFLDV
NT seq 2043 nt   +upstreamnt  +downstreamnt
gtggctgcccagaagtcaggtatcaacgacaacagcaaggattacggcgcttcgtccatc
acggtcctcgagggcctggaagcggttcgtaagaggcccggtatgtacatcggctccacc
ggtgaacgaggcctgcatcacctgatctgggaggtcgtcgacaactccgtcgacgaggcc
atggccggctatgcgtccaccgtcgacgtcaccatccacgaggacggcagcgtcgaggtc
aaggacgacggtcgaggaattcccgtcgccatgcacgcctccggtgttcccaccgtcgag
gtcgtcatgacacagctgcacgcaggcggcaagttcgactccgactcctatgccgtctcc
ggtggactgcacggcgtcggcatctcggtggtgaacgcactctccaccaaggtggaactt
cagatcgcgcgcgacggtcatcgctacaagcagacctacgactacgccaagcccagcccg
ctcgagaccgtcggcgataccgacgagaccgggaccaccgtacgattctgggccgacggc
aagatcttcgagactctcgactacagcttcgagaccgtgcaccgtcgcctgcaggagatg
gcgttcctgaacaagggactgaccatcaacttcaccgacgagcgggtggcagccaccgac
gccaccgaggaagaactcggtgagacggccgaggcacccaagaccgccgaggaagaacag
gccgacgcggccgtcgccaagccggccaaggtgcgcaagcggacctatcactacccggac
ggcctggtcgacttcgtcaagcacatcaacaggaccaagaccgcgatccacaattcggtc
gtcggcttcaccggtaagggtgagggccacgaggtcgagatcgccatgcagtggaacgcc
ggttactccgagtcggtacacaccttcgccaacaccatcaacacgcacgagggcggcacc
cacgaagagggcttccgaaccgcgctcacctcgacggtgaacaagtacgcactcgagaag
aagctcgtcaaggagaaggacgtcaagctcaccggcgacgacatccgtgagggtctggcc
gcagtcatctcggtacgggtcggcgagccgcagttcgagggacagaccaagaccaagctc
ggcaacaccgagatcaggtcgttcgtgcagaaggcatgcaacgagcacctggcgcactgg
ttcgaatcgaaccccgccgacgccaagaccatcatcaacaaggcggtctcctccgcgcag
gcccggatggccgcacgcaaggcgcgagaattggtgcgccgcaagagcgcaaccgatatc
ggaggcctgccgggcaagctcgccgactgccgctcgaacgatccgagcaagtccgagatc
tacatcgtggagggcgactccgccggcggctcggccaaatcgggacgcgattcgatgttc
caggcgatcctgccgctgcgcggaaagatcatcaacgtcgagaaggctcgcatcgaccgc
gtcctcaagaacaacgaggtccagtcgatcatcaccgccttcggcaccggcatccacgac
gagttcgacatcaccaagcttcgctatcacaagatcgtgctgatggccgacgccgacgtc
gacggccagcacatctcgaccctgctgatgacgctgctgttccgcttcatgcgaccgttg
atcgagcacggccacgtctacctggccatgccgccgctgtacaagttgaagtggagccgg
ggtgaacccgacttcgcctactccgaccgcgagcgcgacggtctgctcgaggccggtatc
gcgaacaagcgcaagatcaacgtcgaggacggcgtccagcgctacaagggcctcggcgag
atgaacgccaaggaactgtgggagaccaccatggatccgtcggtgcgcgtcctgcgtctg
gtgacactggacgacgcggcggcagccgacgagctgttcagcgtgctgatgggcgaggac
gtgtccgcgcgtcgtagcttcatcgcccgcaacgcgaaagatgttcgctttcttgacgtt
tag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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