KEGG   Rhodanobacter denitrificans: R2APBS1_3345
Entry
R2APBS1_3345      CDS       T02495                                 
Name
(GenBank) penicillin-binding protein, 1A family
  KO
K05366  penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
Organism
rhd  Rhodanobacter denitrificans
Pathway
rhd00550  Peptidoglycan biosynthesis
rhd01100  Metabolic pathways
rhd01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:rhd00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    R2APBS1_3345
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    R2APBS1_3345
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:rhd01003]
    R2APBS1_3345
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:rhd01011]
    R2APBS1_3345
Enzymes [BR:rhd01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.99  Transferring other glycosyl groups
    2.4.99.28  peptidoglycan glycosyltransferase
     R2APBS1_3345
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     R2APBS1_3345
Glycosyltransferases [BR:rhd01003]
 Polysaccharide
  Bacterial polysaccharide (excluding LPS)
   R2APBS1_3345
Peptidoglycan biosynthesis and degradation proteins [BR:rhd01011]
 Peptidoglycan biosynthesis and degradation
  Glycosyltransferase/DD-Transpeptidase (Class A PBP)
   R2APBS1_3345
SSDB
Motif
Pfam: Transgly PCB_OB Transpeptidase
Other DBs
NCBI-ProteinID: AGG90409
UniProt: M4NHN1
Position
3535230..3537758
AA seq 842 aa
MQIFKRLLRWALVLAFSGLLLAVVAVGVAYWLIAPRLPSVAELKNYPMQVPLRVLSADGK
LIASFGETRRIPVDIGNVPDRLKHAVLSAEDADFYHHPGVDWHGIARAGWHVLVTGGDKG
PGGSTITQQVARNFFLSPEKLYSRKLTEIFIALRIEHELSKDQILELYLNKMFLGHRSYG
VAAAAEYYYGKTLDQLTVAECALIASTFQLPSAVNPINSPKRAMARRNWVLGEMLRHDYI
TRAVYEQAIAEPNHAYPHEQPIEVDAPYLAEMVRRQVLDRFGNDALTEGYVVRTTLQSSR
QQAAVEALRDGLVAYDRRHGWRGPEAHQDLPAGAGEADLDGLLSAYASVSGMQPGVVTAS
DAKQATVYLSSRESVILDLAAVSWARPHISDDRVGAAPTRVDGVLKRGDIIRLARDDKGE
WQLAQIPEAQAALASIAPEDGSIQALVGGFNFVRSKFNRAVMAARQPGSSFKPYLYSAAF
ERGFTPASIINDAPLALPDPSRPNGIWTPSNDDDKFAGPMRLREALVQSKNLVSVRLLDA
VGVRYMREYATRFGFSQDAMPANLSMALGTASVSPMGMARGYAVFANGGYLVTPYFIHEI
DDRTGQAVYVANPARACRNCQERLLDTQPPGPPPAGMNPTPANNLASTSSAAPAESSSID
GVGDAVLPADAHGDGAHPPVLAPHVIEARNDYLVTSLMKDVILRGTGSAARALGRDDLAG
KTGSTNDHRDAWFVGFDGELSTAVWVGFDNYNSLGRGEFGARAALPIWMSYMGSVLKGQP
SSTLPMPPGISTVWINRDSGLPASSDDPDGINEMFKVEDVDRLRSQAAQQKEQDQQHAYD
IF
NT seq 2529 nt   +upstreamnt  +downstreamnt
atgcaaattttcaaacgcttgctgcgctgggctctggtcctggccttttccggtttgctc
ctggcagttgtcgcggtaggtgtggcgtattggctgatcgccccgaggctcccctcggtg
gccgaactgaagaactacccgatgcaggtgccgctgcgcgtgctgagcgccgacggcaag
ctgatcgccagcttcggcgagacccggcgcatcccggtggatatcgggaacgtgccggac
cggctcaagcacgccgtgctgtcggccgaggacgcggacttctaccaccaccccggcgtg
gactggcacggcatcgcgcgcgccggctggcatgtgctggtaaccggcggcgacaagggc
cccggcggctccaccatcacccagcaggtggcccgcaacttcttcctgagccccgaaaaa
ctgtattcgcgcaagctcaccgagatcttcatcgcgctgcgcatcgagcatgagctgagc
aaggaccagatcctcgagctgtatctcaacaagatgttcctcggccaccgctcctacggc
gtggccgcggcggccgagtattactacggcaagacgctggaccagctgaccgtggccgaa
tgcgcactgatcgcctcgaccttccagctgccctcggcggtcaatccgatcaacagcccg
aagcgggcgatggcccggcgcaactgggtactgggcgaaatgctgcgccacgactacatc
acccgggccgtgtacgaacaggcgatcgccgagccgaaccatgcctacccgcacgagcag
ccgatcgaggtggatgccccttacctggccgagatggtgcgccggcaggtgctcgaccgc
ttcggcaacgatgcgctgaccgagggttacgtggtcaggaccacgctgcagagcagccgc
cagcaagccgccgtggaagcactgcgcgacgggctggtcgcctatgaccgccggcacggc
tggcgcggaccggaggcccaccaggacctgccggccggcgccggcgaggcggacctcgac
ggcctgctgtccgcctacgccagcgtctccggcatgcagccgggcgtcgtcaccgccagc
gacgcgaagcaggccacggtctacctgtccagccgcgagagcgtcatcctcgacctggcc
gccgtcagctgggcgcgtccgcacatcagcgacgaccgtgtcggcgcggcgccgacccgc
gtcgacggcgtgctcaagcgcggcgacatcatccggctggcgcgcgacgacaagggcgag
tggcagctggcgcagatccccgaggcgcaggccgcgctagcctcgatcgcgccggaggac
ggctcgatccaggcgctggtgggcggcttcaacttcgtgcgcagcaagttcaaccgggcc
gtgatggcggcgcgccagcccggctccagcttcaagccctacctgtactcggcagcgttc
gagcgcggcttcaccccggcctcgatcatcaacgatgcgccgctcgccctgcccgacccc
tcgcgcccgaacggcatctggacgccctccaacgacgacgacaagttcgccgggccgatg
cgcctgcgcgaagcgctggtgcagtcgaagaacctggtctcggtgcgcctgctcgatgcc
gtcggcgtgcgctacatgcgcgagtacgccacccgtttcggcttctcgcaggacgcgatg
ccggccaacctgtcgatggcgctgggcaccgcctcggtgtcaccgatgggcatggcgcgc
ggctacgcggtgttcgccaacggcggctacctggtcacgccgtacttcatccacgaaatc
gacgaccgcaccggccaggcggtctacgtggccaaccccgcgcgcgcctgccgcaactgc
caggagcgcctgctcgacacgcagccgcccgggccgccaccggccggaatgaatcccaca
ccggccaacaacctcgccagcacctcgtctgcggcacccgctgaatccagcagcatcgat
ggcgtcggcgacgcggtactgcctgccgacgcgcacggcgacggcgcgcacccgccggtg
ctcgcgccgcacgtgatcgaggcgcgcaacgactacctggtgacctcgctgatgaaggac
gtgatcctgcgtggcaccggctcggccgcacgcgcgctgggtcgcgacgatctggccggc
aagaccggctccaccaacgaccaccgcgacgcctggttcgtcggtttcgacggcgagctg
tcgaccgccgtgtgggtgggcttcgacaactacaactcgctcggccgcggcgagttcggc
gccagggccgcgctgccgatctggatgtcctacatgggcagtgtgctgaagggacagccg
tcgagcacgttgccgatgccgccgggaatcagtacggtatggatcaaccgcgacagcggc
ctgcccgcctcgtcggacgatccggacggcatcaacgagatgttcaaggtggaagacgtc
gaccggctgcgcagccaggccgcccagcagaaggaacaggaccagcagcacgcctacgac
atcttctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

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