KEGG   Sinorhizobium fredii NGR234: NGR_c04080
Entry
NGR_c04080        CDS       T00888                                 
Symbol
groEL1
Name
(GenBank) 60 kDa chaperonin 2
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
rhi  Sinorhizobium fredii NGR234
Pathway
rhi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rhi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NGR_c04080 (groEL1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rhi03019]
    NGR_c04080 (groEL1)
   03110 Chaperones and folding catalysts [BR:rhi03110]
    NGR_c04080 (groEL1)
   03029 Mitochondrial biogenesis [BR:rhi03029]
    NGR_c04080 (groEL1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rhi04147]
    NGR_c04080 (groEL1)
Enzymes [BR:rhi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     NGR_c04080 (groEL1)
Messenger RNA biogenesis [BR:rhi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     NGR_c04080 (groEL1)
Chaperones and folding catalysts [BR:rhi03110]
 Heat shock proteins
  HSP60 / Chaperonin
   NGR_c04080 (groEL1)
Mitochondrial biogenesis [BR:rhi03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    NGR_c04080 (groEL1)
Exosome [BR:rhi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   NGR_c04080 (groEL1)
  Exosomal proteins of other body fluids (saliva and urine)
   NGR_c04080 (groEL1)
  Exosomal proteins of breast cancer cells
   NGR_c04080 (groEL1)
  Exosomal proteins of colorectal cancer cells
   NGR_c04080 (groEL1)
  Exosomal proteins of bladder cancer cells
   NGR_c04080 (groEL1)
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: ACP24204
UniProt: C3MGT9
Position
complement(456136..457773)
AA seq 545 aa
MAAKEVKFGRTAREKMLRGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEI
ELEDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGI
DLAVAEVVKDLLAKAKKINTSDEVAQVGTISANGEKQIGLDIAEAMQKVGNEGVITVEEA
KTAETELEVVEGMQFDRGYLSPYFVTNPEKMVADLEDAFILLHEKKLSNLQAMLPVLEAV
VQTGKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEDLGIKLENVTLDMLGRAKKVSISKENTTIVDGAGQKADIEGRVAQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGATEIEVKEKKDRIDDALNATRAAVQEGIVPGGGVALL
RSSVKITAKGENDDQDAGVNIVRRALQAPARQIAENAGDEASIVVGKILEKNTDDFGYNA
QTGEYGDMIAMGIIDPVKVVRTALQDAASVASLLITTEAMIAELPKKDAPAMPGGMGGMG
GMDMM
NT seq 1638 nt   +upstreamnt  +downstreamnt
atggcagctaaagaagtcaagttcggccgcaccgcgcgcgaaaagatgctgcgcggcgtc
gacatcctcgccgatgcagtcaaggtaacgctcggcccgaagggtcgtaacgtcgttatc
gacaagtccttcggcgctccgcgcatcaccaaggacggcgtttcggtcgccaaggaaatc
gaactcgaagacaagttcgagaacatgggcgcccagatggtccgcgaagtcgcttcgaag
accaacgacatcgccggcgacggcacgacgacggcaaccgttctcgcccaggcgatcgtt
cgcgaaggcgccaaggccgttgccgccggcatgaacccgatggacctgaagcgcggcatc
gaccttgccgtcgccgaagtcgtcaaggacctgctcgccaaggccaagaagatcaacacc
tcggacgaagttgcccaggtcggcacgatctcggcaaacggcgaaaagcagatcggcctc
gacattgcagaagcaatgcagaaggtcggcaacgaaggcgtcatcacggttgaagaagcc
aagaccgccgagaccgagctcgaagtcgtcgaaggcatgcagttcgaccgcggctacctg
tcgccctacttcgtcaccaacccggaaaagatggtcgccgatctcgaagacgctttcatt
ctcctgcacgagaagaagctctcgaacctccaggcgatgctcccggttctcgaagccgtc
gtccagaccggcaagccgctcctcatcatcgctgaagacgtcgaaggcgaagcgctcgct
accctcgtcgtcaacaagctgcgcggcggtctgaagatcgctgccgtcaaggctccgggc
ttcggcgaccgccgcaaggccatgctcgaagacatcgccatcctgacgggcggcacggtg
atctccgaggacctcggcatcaagctcgaaaacgtcacgctcgacatgctcggccgtgcg
aagaaggtctcgatctccaaggaaaacacgacgatcgtcgacggcgccggccagaaggcc
gacatcgaaggccgcgttgcccagatcaaggcccagatcgaagagaccacctccgactac
gaccgcgagaagctgcaggaacgccttgccaagctcgccggcggcgttgccgtcatccgc
gtcggcggtgcgacggaaatcgaagtgaaggaaaagaaggaccgcatcgacgacgccctc
aacgcgacgcgcgctgccgttcaggaaggcatcgtaccgggcggcggcgtcgctctgctg
cgctcctccgtcaagatcaccgccaagggcgaaaacgacgaccaggacgccggcgtcaac
atcgttcgccgcgctctgcaggctccggcccgccagatcgctgaaaacgctggtgatgaa
gcctcgatcgttgtcggcaagatcctcgagaagaacaccgacgacttcggctacaacgct
cagaccggtgaatatggcgacatgatcgccatgggcatcatcgacccggtcaaggtcgtt
cgcaccgccctgcaggacgcagcctcggttgcttcgctgctgatcaccaccgaagccatg
atcgccgagctgccgaagaaggacgctccggcaatgccgggcggcatgggcggcatgggc
ggcatggacatgatgtga

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system