KEGG T00888: NGR

Sinorhizobium fredii NGR234: NGR_c29480

Entry

NGR_c29480 CDS T00888

Gene name

xylA

Definition

xylose isomerase (EC:5.3.1.5)

Orthology

K01805

xylose isomerase [EC:5.3.1.5]

Organism

rhi Sinorhizobium fredii NGR234

Pathway

rhi00040	Pentose and glucuronate interconversions
rhi00051	Fructose and mannose metabolism
rhi01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Pentose and glucuronate interconversions [PATH:rhi00040]
Metabolism; Carbohydrate metabolism; Fructose and mannose metabolism [PATH:rhi00051]

SSDB

Motif

Pfam:

AP_endonuc_2

Other DBs

NCBI-GI:

NCBI-GeneID:

RhizoBase:

UniProt:

Position

complement(3088850..3090160)

AA seq 436 aa
MSTGFFGDIAKIKYEGPESTNPLAFRHYNPDEIVLGKRMEDHLRFAVAYWHTFVWPGGDP
FGGQTFERPWFKDTMDAAKLKADVAFEFFQLLGVPFYCFHDADVRPEGRNFAENTSNLNE
IVDHFAEKQAATGVKLLWGTANLFSNRRYMGGAATNPDPDVFAFAAATVKTCIDATQRLG
GENYVLWGGREGYETLLNTDLKRELDQLGRFVNLVVEYKHKIGFKGAILIEPKPQEPTKH
QYDFDVATVYGFLKKYGLENEVKVNIEQGHAILAGHSFEHELALANALGIFGSIDMNRND
YQSGWDTDQFPNNVPEMALAYHHVLSGGGFKTGGTNFDAKLRRQSIDPEDLLIGHIGGMD
CCARGLKAAAKMVEDKALSGPLEKRYAGWNVPEAKKMLDGGFSLDEIEAWVRKADLNPQP
KSGRQEYLENVVNRYV

NT seq 1311 nt +upstreamnt +downstreamnt
gtgagcacgggttttttcggcgatatcgccaagatcaaatatgaagggccggagagcacc
aatccgctcgccttccgccactacaatccggacgagatcgtcctcggcaagcggatggaa
gaccatctgcgctttgccgttgcctattggcacactttcgtctggccgggcggcgatccg
ttcggcggccagacctttgaacgtccctggttcaaggacacgatggacgcggcgaagctg
aaggccgacgtggccttcgaattcttccagcttctcggcgtccccttctattgcttccat
gacgccgacgtgcgtcccgaaggccggaacttcgccgagaacaccagcaacctcaacgag
atcgtcgatcacttcgccgagaagcaggccgcgaccggcgtcaagctgctgtggggcacg
gcgaacctgttctcgaaccgccgctatatgggcggtgcggcgaccaaccccgatccggac
gtcttcgcctttgccgcggcgacggtgaagacctgcatcgacgcgacacaacggctcggc
ggcgagaactacgtgctgtggggcgggcgtgaaggctatgagacgttgctcaacaccgac
ctgaagcgcgagctcgaccagctcggccgcttcgtcaacctcgtcgtcgagtacaagcac
aagatcggcttcaagggcgcgatcctgatcgagccgaagccgcaggagccgaccaagcat
caatacgatttcgacgtcgcgaccgtctacggtttcctcaagaaatacggcctcgagaac
gaggtgaaggtcaatatcgagcagggccacgcgattctcgccggccattccttcgagcac
gaactggcgctcgccaatgcgctcggcatcttcggttcgatcgacatgaaccgcaacgac
taccagtccggctgggacacagaccagttcccgaacaacgttccggaaatggcgctcgcc
tatcaccacgtgctctcgggcggcggcttcaagaccggcggcacgaacttcgatgcgaag
ctccgccgccagtcgatcgatccggaggatctgttgatcggccatatcggcggcatggat
tgctgcgcccgcggtctcaaggcggcggcgaagatggtcgaggacaaggcgctctccggg
ccgctcgaaaagcgctatgccggctggaacgtgccggaggcgaagaagatgctcgatggc
ggcttctcgctcgatgagattgaagcctgggtgcgcaaggccgatctcaatccacagccg
aaatccggcaggcaggaatatctggagaacgtcgtcaaccgctacgtctga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
   RHIZOBASE-RHI (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (19)   

Download RDF

DBGET integrated database retrieval system