KEGG   Sinorhizobium fredii NGR234: NGR_c29920
Entry
NGR_c29920        CDS       T00888                                 
Symbol
lpdA2
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rhi  Sinorhizobium fredii NGR234
Pathway
rhi00010  Glycolysis / Gluconeogenesis
rhi00020  Citrate cycle (TCA cycle)
rhi00260  Glycine, serine and threonine metabolism
rhi00280  Valine, leucine and isoleucine degradation
rhi00310  Lysine degradation
rhi00380  Tryptophan metabolism
rhi00620  Pyruvate metabolism
rhi00630  Glyoxylate and dicarboxylate metabolism
rhi00640  Propanoate metabolism
rhi00785  Lipoic acid metabolism
rhi01100  Metabolic pathways
rhi01110  Biosynthesis of secondary metabolites
rhi01120  Microbial metabolism in diverse environments
rhi01200  Carbon metabolism
rhi01210  2-Oxocarboxylic acid metabolism
rhi01240  Biosynthesis of cofactors
Module
rhi_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rhi_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhi_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
rhi_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rhi_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rhi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    NGR_c29920 (lpdA2)
   00020 Citrate cycle (TCA cycle)
    NGR_c29920 (lpdA2)
   00620 Pyruvate metabolism
    NGR_c29920 (lpdA2)
   00630 Glyoxylate and dicarboxylate metabolism
    NGR_c29920 (lpdA2)
   00640 Propanoate metabolism
    NGR_c29920 (lpdA2)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    NGR_c29920 (lpdA2)
   00280 Valine, leucine and isoleucine degradation
    NGR_c29920 (lpdA2)
   00310 Lysine degradation
    NGR_c29920 (lpdA2)
   00380 Tryptophan metabolism
    NGR_c29920 (lpdA2)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    NGR_c29920 (lpdA2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rhi04147]
    NGR_c29920 (lpdA2)
Enzymes [BR:rhi01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     NGR_c29920 (lpdA2)
Exosome [BR:rhi04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   NGR_c29920 (lpdA2)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 GIDA HI0933_like NAD_binding_8 FAD_binding_3 UDPG_MGDP_dh_N FAD_oxidored AlaDh_PNT_C 3HCDH_N DAO
Other DBs
NCBI-ProteinID: ACP26735
UniProt: C3M924
Position
3138508..3139902
AA seq 464 aa
MKEISCKLLVLGAGPGGYVCAIRAGQLGVNTVIVEKAKAGGTCLNVGCIPSKALIHAAEE
FHKLRAVASGKSPLGLSLEAPAIDLERTVAWKDGIVGRLNSGVTGLLKKAGVKAVIGQAR
FVDGKTVDVETEIGVQRIRAEAIVIATGSAPVELPDLPFGDNVISSTEALALKEVPQTLA
VIGGGYIGLELGTAFAKLGSKVTVLEAMDRILPQYDADLSKPVMKRLGELGIDVFTRTAA
KRLSADRRGLLAEENGRAFEVAAEKVLVTVGRRPVVEGWGLEEIDLDRSGKFIRIDDQCR
TSMRGIYAIGDVTGEPMLAHRAMAQGEMVAEIVAGQKRSWDKRCIPAVCFTDPEIVSAGL
SPEEARAAGIEIKIGQFPFQANGRAMTTLAEDGFVRIVARADNHLVLGIHAVGHAVSELS
SAFALAIEMGARLEDIAGTIHAHPTQSEAFQEAALKGLGHALHI
NT seq 1395 nt   +upstreamnt  +downstreamnt
gtgaaggaaatttcctgcaagctcctggtgctcggcgccggccccggcggctatgtctgc
gccatccgggccggacaactcggcgtcaacaccgtgatcgtcgagaaggcgaaggcgggc
ggcacctgcctcaatgtcggctgcatcccctcgaaggcgctgatccatgcggccgaggaa
tttcacaagctgcgcgccgtcgcctccggaaaaagcccgctcggcctctcgcttgaggcc
ccggcgatcgacctcgagcgaacggtcgcctggaaggacggcattgtcggccgcctgaac
agcggcgtgacagggcttctgaagaaggccggcgtcaaggccgttatcggtcaagcgcgc
ttcgtcgacggaaagacggtggatgtggaaaccgaaatcggcgtccagcgcattcgcgcc
gaagcgatcgtcatcgccaccggttcggctccggtcgagcttcccgacctgcctttcggc
gacaatgtcatctcctcgaccgaggcgctggctttgaaggaagtgccgcagacgctcgcc
gtcatcggcggcggctatatcggcctcgaactcggcaccgccttcgccaagctcggctcg
aaggtcaccgtgctcgaagcgatggaccgcatcctgccgcaatatgacgccgacctgtcg
aagccggtgatgaagcggctcggcgaactcggcatcgacgtcttcacccgcaccgcagcc
aagcgcctgtcggcggatcggcgcggcttgcttgccgaggaaaacggccgcgccttcgag
gtggcggcggagaaggttctggtcaccgtcggtcgtcggcccgtggtcgagggctggggg
ctggaggagatcgatctcgaccgttcgggcaagttcatccgcatcgacgaccaatgccgc
acctcgatgcgcggcatctatgcgatcggcgatgtcaccggcgaaccgatgctcgcccat
cgcgccatggcgcagggcgagatggtcgcggagatcgtcgccggccagaagcgcagctgg
gacaagcgctgcatcccggccgtctgcttcactgacccggagattgtcagcgccggtctc
tcgccggaggaggcgcgcgcggccggcatcgagatcaagatcggccagttccccttccag
gcgaacggccgtgccatgacgacgcttgccgaggatggcttcgtccgcatcgtcgcccgc
gccgacaaccacctcgtcctcggcatccacgccgtcgggcatgcggtctccgagctttcc
tccgcctttgcgctcgccatcgaaatgggtgcgcgtctcgaggatatcgccggcacgatc
cacgcccatccgacgcagtcggaggccttccaggaagcggccttgaaggggctggggcac
gcgctgcatatctga

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