KEGG   Rhodovulum sp. MB263: B5V46_02395
Entry
B5V46_02395       CDS       T04771                                 
Name
(GenBank) exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
rhm  Rhodovulum sp. MB263
Pathway
rhm03030  DNA replication
rhm03430  Mismatch repair
rhm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rhm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    B5V46_02395
   03430 Mismatch repair
    B5V46_02395
   03440 Homologous recombination
    B5V46_02395
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rhm03032]
    B5V46_02395
   03400 DNA repair and recombination proteins [BR:rhm03400]
    B5V46_02395
Enzymes [BR:rhm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     B5V46_02395
DNA replication proteins [BR:rhm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     B5V46_02395
DNA repair and recombination proteins [BR:rhm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     B5V46_02395
SSDB
Motif
Pfam: RNase_T PAS_4 PAS_9 PAS_8 PAS RNase_H_2
Other DBs
NCBI-ProteinID: ARC87553
UniProt: A0A1V0HUD5
Position
477633..479702
AA seq 689 aa
MHERLNERLGLRLRFALFFAALALGGMAVLVLGLWFGHARAGGPADGYVIAGMVAGCGLL
GLAAWIGLLFDANVVRPIQALAADLQTRARVDVAADIDEAPARYLGALAPAANAIHDALA
ATREAQDRAVAERTAALNREKAMFEALLRDLAEGVVVATPDHRVMLYNRAALGLLGDLGL
DRPLTALLRPEPLTHALDRMGARAARGEVEAERFLAATASGERFLMARVSPVAVAGQRAG
YVLIFHDATEDLEAHAELDHLFNTMLEGIRRPTAAIGALSDAIEADPEMADEMRAAFFAR
LRGEQAMLVDRMNQLADRYGTATTRRWPMPAVASDDIFDALTARLPGDLRFEGARQFIRC
DGFAISELLARVIEGLRTDGRRDGFVLRAVPEAREVCLELHWRGPPVGDGQIDRWLSAPL
SAGYGEYLGRDALESHGTELWAEPTETGHRLLLPLTAATAPLLTPADPRPEFYDFSLPPP
AAGALADRPLAELRFVVFDTETTGLAPRQGDEIVQIAGVRIVNGRILRGEVFDSLVNPGR
HIPAASTAVHGIDDAMVRGGPDVVAAGRRFHAFCEGAVLVAHNAAFDMTFLKMKEDRLGL
RFDHPVLCTVLLSAALYPHAEDHTLDALAARFGVRLEARNRHTALGDAMATAEVFRQMLG
MLEVAGVRTLGEAMARSNEMHRLRRAQSY
NT seq 2070 nt   +upstreamnt  +downstreamnt
atgcatgagcgactgaatgagcgactggggctgagacttcgtttcgcgctgttcttcgcg
gcgctggcactgggcggcatggcggtgctggtgctggggctctggttcggccatgcccgc
gcgggcggtccggccgacggctatgtgatcgcggggatggtggcgggctgcgggctgctg
gggcttgcggcctggatcgggcttttgttcgacgcgaatgtggtgcggccgatccaggcg
ctggccgccgatctgcagacccgggcccgggtcgatgtcgcggccgatatcgacgaggcg
cccgcgcgctatctgggcgcgctcgcccccgccgccaatgcgatccatgacgcgctggcc
gccacccgcgaggcccaggaccgggccgtggccgagcggaccgccgcgctgaaccgcgaa
aaggcgatgttcgaggcgctgttgcgcgatctggccgaaggggtggtcgtggccacgccc
gatcaccgggtcatgctgtataaccgcgccgcgctcgggcttctgggcgatctggggctc
gaccggccgctgaccgcccttctaaggcccgagccgctgacccatgcgctcgaccggatg
ggagcgcgggccgcccgcggcgaggtcgaggcggaacggttcctggccgccaccgccagc
ggcgagcgcttcctgatggcgcgggtcagcccggtcgcggtcgcgggccagcgcgcgggc
tatgtgctgatcttccacgatgcgaccgaggacctcgaggcgcatgccgagctcgaccat
ctgttcaacaccatgctcgaggggataaggcggccgaccgccgccatcggtgcgctgtcc
gatgccatcgaagccgatcccgagatggctgacgagatgcgcgcggccttctttgcccgg
ctccgcggcgaacaggcgatgctggtcgaccggatgaaccagctcgccgaccgctacggc
accgccaccacccggcgctggccgatgcccgccgtcgcctcggacgacatcttcgatgcg
ctgaccgcgcggctgcccggagatctgcgtttcgagggcgcgcgtcagttcatccgctgc
gacggcttcgcgatttccgagcttctggcccgagtgatcgaggggctgcgcaccgatggc
cggcgcgacggtttcgtcctgcgcgctgtgcccgaggctcgcgaggtctgccttgagctg
cactggcgcggtccgccggtcggcgacgggcagattgaccgctggctctcggcgccgctc
tcggcgggctatggcgaatatctcggccgcgacgcgctcgagagccatggcaccgagctt
tgggcggagccgaccgagaccggccaccgtctgctgctgccgctgaccgctgccacggca
ccgctgctgacgccggccgatccgcgtccggaattctacgacttctcgctgccgccgccc
gccgcaggcgcgctggccgaccggccgctcgccgagctgcgcttcgtcgtcttcgacacc
gagaccaccggccttgcgccgcggcagggcgacgagatcgtgcagatcgccggggtccgg
atcgtcaatggccgcatcctgcgcggcgaggtcttcgacagcctggtcaatccggggcgg
catattccggcggcctcgacggcggttcatggcatcgacgacgcgatggtgcggggcggg
cccgacgtggtcgcggcggggcggcggtttcacgccttttgcgagggggctgttctggtc
gcccataacgccgccttcgacatgaccttcctgaagatgaaggaggaccggctggggctt
cgcttcgaccatccggtgttgtgcaccgtgcttctgtcggcggcgctctatccgcatgcc
gaggatcataccctcgatgcgctggcggcccgtttcggggtgcggctcgaggcccggaac
cgccataccgcgctgggcgatgcgatggcgacggccgaggtgttccgccagatgctggga
atgctggaggttgcgggggtgcggacgctgggcgaggcgatggcgcggtccaacgagatg
caccgcctccgccgcgcccagagctactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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