KEGG T04420: AMJ98

Rhizobium sp. N1341: AMJ98_CH02162

Entry

AMJ98_CH02162     CDS       T04420

Symbol

gyrA

Name

(GenBank) DNA gyrase subunit A

K02469

DNA gyrase subunit A [EC:5.6.2.2]

Organism

rhn Rhizobium sp. N1341

Brite

KEGG Orthology (KO) [BR:rhn00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rhn03032]
    AMJ98_CH02162 (gyrA)
   03400 DNA repair and recombination proteins [BR:rhn03400]
    AMJ98_CH02162 (gyrA)
Enzymes [BR:rhn01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     AMJ98_CH02162 (gyrA)
DNA replication proteins [BR:rhn03032]
Prokaryotic type
  DNA Topoisomerases
   AMJ98_CH02162 (gyrA)
DNA repair and recombination proteins [BR:rhn03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      AMJ98_CH02162 (gyrA)

SSDB

Motif

Pfam:

DNA_topoisoIV DNA_gyraseA_C CAP18_C

Other DBs

NCBI-ProteinID:

ANL09828

Position

2169476..2172202

AA seq 908 aa
MEEMQRSYLDYAMSVIVSRALPDVRDGLKPVHRRILYGMSELGIDWNKKYVKCARVTGDV
MGKYHPHGNAAIYDALARMAQPWSLRLPLIDGQGNFGSVDGDPPAAERYTECRLEKAAHS
LLDDLDKETVDFRDNYDGTLSEPVVVPAKFPNLLVNGAGGIAVGMATNIPPHNLSEVIDG
CIALINDPAIELPELMQIIPGPDFPTGAKILGRAGIRSAYETGRGSVIMRGVATIEPMRG
DREQIIITEIPYQVNKATMIEKMAELVREKRIEGISDLRDESDRQGYRVVIELKRDANAE
VILNQLYRYTPLQTSFGCNMVALNGGKPEQLTLLDMLRAFVSFREEVVSRRTKFLLRKAR
ERAHVLVGLAIAVANIDEVIRVIRQAPDPQSAREELMTRRWPAEDVESLIRLIDDPRHRI
NDDLTYNLSEEQARAILELRLARLTALGRDEIGDELNKIGEEIRDYLDILSSRVRIQTIV
KDELSAVRDEFGTPRRTEIVDGGLEMDDEDLIAREDMVVTVSHLGYIKRVPLTTYRAQRR
GGKGRSGMTTRDEDFVSRLFVVNTHTPVLFFSSRGIVYKEKVWRLPIGTPTSRGKALINM
LPLEPGERITTILPLPEDEASWDNLDVMFSTTRGTVRRNKLSDFVQVNRNGKIAMKLEEE
GDEILSVETCTERDDVLLTTALGQCIRFSVDDVRVFAGRNSIGVRGINLGEGDRIISMTI
VGHVDAEPWERAAYLKRSAAERRATGVDEEDIALVGEEVTEEGQLSDERYEELKAREQFV
LTVSEKGFGKRSSSYDFRISGRGGKGIRATDTSKTGEIGELVAAFPVDDGDQIMLVSDGG
QLIRVPVGGIRIASRATKGVTIFSTAKDEKVVSVERISEPEEDETEGTVEGADETPVADG
DPGGAAEE

NT seq 2727 nt +upstreamnt +downstreamnt
atggaggaaatgcagcggtcgtatctcgattacgccatgagcgtcatcgtcagccgcgcg
ctgcccgacgtgcgcgacggcctgaagcccgtgcaccggcgcatcctctacggcatgtcc
gagctcggcatcgactggaacaagaaatacgtcaaatgcgcccgtgtcaccggtgacgtg
atgggtaaataccatccgcacggcaacgccgcgatttatgacgcgctcgcccgcatggcg
cagccatggtcgctgcgcctgccgctgatcgacggtcagggcaatttcggctcggtcgac
ggcgatccgccggcggccgaacgatacaccgaatgccgcctggaaaaggctgcccattcg
ctgctcgacgatctcgacaaggaaaccgtcgacttccgcgacaactatgacggcacgctg
tccgagccggtcgtggttcccgccaaattccctaacctgctcgtcaacggcgccggcggt
atcgccgtcggcatggcgaccaacattccgccgcacaacctgtcggaagttatcgacggc
tgcattgcgctgatcaacgatccggcgatcgagctgccggaactgatgcagatcattccc
ggcccggatttccccacaggcgccaagatcctcggccgtgccggcatccgctcggcctac
gagaccggccgcggctccgtcatcatgcgcggcgtcgccaccatcgagccgatgcgtggc
gaccgcgagcagatcatcatcaccgaaattccctatcaggtgaacaaggcgacgatgatc
gagaagatggccgagttggtgcgtgaaaagcgcatcgaaggcatctccgatctgcgcgat
gaatccgaccgccagggctatcgcgtcgtcatcgaattgaagcgcgatgccaatgccgag
gtcatcctcaatcagctttaccgctacacgccgctgcagacctccttcggctgcaatatg
gtggcgctgaacggcggcaagccggagcagttgacgctactcgacatgctgcgcgccttc
gtctccttccgcgaagaagtcgttagccggagaacgaaatttctgcttcgcaaggcgcgc
gagcgcgcccacgtcttggttggtctcgccatcgccgtcgccaatatcgacgaagtcatt
cgcgtcattcgtcaggcgccggatccgcagtcggcccgcgaagagctgatgacgcgccgc
tggccggccgaagatgtcgaaagcctgatccgtctgatcgacgatccgcgccaccgcatc
aacgacgatctcacctacaacctctcggaagagcaggcgcgcgctattctcgagctgcgc
cttgcccgcctgactgcactcggtcgtgacgaaatcggtgatgagctcaataagataggc
gaggaaatccgggattatctcgatattctttcctcgcgtgtccgcatccagaccatcgtc
aaggacgagctttccgccgtccgcgacgagttcggcacgccacgccgcaccgagatcgtc
gatggcggcctggagatggacgacgaggatctgatcgcccgcgaagacatggtggtcacc
gtctcgcatctcggctacatcaagcgcgtgccgctgaccacctaccgcgcccagcgccgc
ggcggtaagggccgctccggcatgacgacccgcgatgaggatttcgttagccggctattc
gtggtcaatacccatacgccggtcctgttcttctcctcccgcggcatcgtctataaggag
aaggtctggcgtctgccgatcggcacgccgacctcgcgcggcaaagcgctgatcaacatg
ctgccgctcgaacccggcgaacgcatcaccaccatcctgcccttgcccgaggacgaggcg
agctgggacaatctcgacgtcatgttctcgacaacgcgcggtacggttcgccgcaacaag
ctgtcggacttcgtccaggtcaaccgcaacggcaagatcgccatgaagctggaggaggag
ggcgacgaaatcctctccgtcgagacatgcaccgagcgggacgacgttctcctgaccacg
gcgctcggccagtgcatccgcttctccgtcgacgacgtccgcgtctttgccggccgcaac
tcgatcggcgtgcgcggcatcaatctcggcgagggcgaccgcatcatctcgatgacgatc
gtcggccatgtcgatgcggagccgtgggaacgggccgcctatctcaagcgttccgccgcc
gagcgtcgcgcgacgggcgtcgatgaagaggatatcgcgcttgtcggcgaggaagtcact
gaggagggacagctctccgacgaacgctacgaagagctgaaggcacgcgagcagttcgtg
ctcaccgtctccgaaaagggcttcggcaagcgttcgtcttcctacgacttccgcatctcc
ggccgtggcggcaagggcatccgcgccaccgacacgtcgaagaccggcgagatcggcgaa
ctcgttgcagccttcccggtcgatgacggcgaccagatcatgctcgtctccgatggcggc
cagttgatccgcgtaccggtcggaggcatccgcatcgccagccgcgccaccaagggcgtc
accatcttctccacggccaaggacgagaaggtcgtttcggtcgagcgcatcagcgagccg
gaggaggatgagacggaagggaccgtcgaaggcgccgatgagacgcctgtcgccgatggc
gatccgggcggtgctgccgaagaatga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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