KEGG   Rhizobium sp. N731: AMK02_CH01676
Entry
AMK02_CH01676     CDS       T04809                                 
Symbol
rnr
Name
(GenBank) ribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
rhx  Rhizobium sp. N731
Pathway
rhx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rhx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AMK02_CH01676 (rnr)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rhx03019]
    AMK02_CH01676 (rnr)
   03016 Transfer RNA biogenesis [BR:rhx03016]
    AMK02_CH01676 (rnr)
Enzymes [BR:rhx01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     AMK02_CH01676 (rnr)
Messenger RNA biogenesis [BR:rhx03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AMK02_CH01676 (rnr)
Transfer RNA biogenesis [BR:rhx03016]
 Prokaryotic type
  tRNA degradation factors
   AMK02_CH01676 (rnr)
SSDB
Motif
Pfam: RNB CSD2 S1 FaeA HTH_IclR
Other DBs
NCBI-ProteinID: ANK85291
Position
complement(1680796..1683168)
AA seq 790 aa
MSKTPRDRTNPAGKRPGKIGRAGRDISAVEPLNIVHGTLPSREVILRFIADHPQKASKRE
LAKAFGLKGDSRVELKHMLQELEQEGMLQKSRKSLIRPGALPPVTVLDITTRDKDGDLIG
RPAEWPEEQGVAPAVAIRQQSPAGRQGKGKAPVAGLGDRILAKIFPAVDRGGPAYTARII
KVIDRRRGAAMGVFRSAPGGGGRLLPIERRGEEMVIDPDYTGGAKDGDLVEIEVARLGRF
GLPRAKVLSVVGSVGSEKAISMIAIHAHGIPHIFPPAVIAEAEAAKPATMAHREDWRDVP
LITIDPADAKDHDDAVYAEIDRSPDNAGGVIVTVAIADVSWYVRPNSPLDREALKRGNSV
YFPDRVVPMLPERISNDLCSLKEGVDRPAIAVRMSFSGEGRKIGHTFHRIMMKSAAKLSY
QQAQAAIDGRPDDQTGPMLEPILKPLWHAYGVMKRGRDRRQPLELDMPERKILLKPDGTV
DRVFVPPRLDAHKLIEEMMIQANVCAAETLEKKRQPLVYRIHDGPTLAKQEVLREFLATL
GISLAKGGNMRANSFNGILAKADGTAHQTMVNEMVLRSQSQAIYSPENIGHFGLNLMKYA
HFTSPIRRYADLIVHRALVGSLGFGEGGITPDEEASLDDIAAEISTFERRAMAAERETID
RLIAHHLSTRVGEEFAGRVSGVTKSGLFITLPDYGADGFVPISTLGTDYFIYDEAHQALS
GEKTGLGYRLGDSVTVKLAEAIPLAGALRFEMLSEGREMPTAVRSFHKAGRRDRGQVRKK
PGTRPPRGRR
NT seq 2373 nt   +upstreamnt  +downstreamnt
gtgagcaagacaccgcgcgacagaacgaaccccgcgggcaagcgcccgggcaagatcggc
cgcgccggcagggatatttccgccgtcgaaccgctgaacatcgtccacggcacgctgccc
tcgcgggaagtgatcctgcgtttcatcgccgatcatccgcagaaggcttccaagcgtgaa
cttgccaaggcgttcgggctgaaaggtgacagtcgcgtcgagctcaagcacatgctgcag
gagctcgagcaggaaggcatgctgcaaaagagccgcaagtcgctcattcgtcccggcgct
cttccgcccgtcaccgttctcgatatcacgacgcgcgataaggacggcgacctgatcggc
cggccggcggaatggccagaggagcagggtgtggcgcctgccgtcgccatccgtcagcaa
tcgccggcaggccgccagggtaagggcaaggcgcccgtcgccgggctcggcgaccgaatc
ttggcgaagatcttcccggcggtcgatcgcggcgggccggcttatacagcgcgtatcatc
aaggtgatcgacaggcgccgcggtgcggcgatgggcgttttccgcagcgcgccgggcggc
ggcggccgcctgttgccaatcgaacggcgcggcgaagagatggtgatcgaccccgactat
accggcggcgccaaggatggcgacttggtcgagattgaagttgcgcgcctcgggcgcttc
ggcctgccgcgcgccaaggtcctttccgtcgtcggctcggtcggctcggaaaaggcgatc
tcgatgatcgcgatccatgcacacggcatcccgcatatcttcccgccggccgtgatcgcc
gaggcggaagcggcaaaaccagcgacgatggcgcatcgtgaagattggcgcgacgtgccg
ctgatcaccatcgatccggccgacgccaaggaccatgacgacgcagtttacgccgagatc
gaccgctcgcccgacaatgccggcggcgttatcgtcaccgtcgcgatcgccgacgtctcc
tggtatgtccgccccaattcgccgctcgaccgcgaggcgctgaagcgcggcaactcggtc
tatttccccgatcgcgtcgtgccgatgctgccggagcgcatctccaatgatctctgctcg
ctgaaggaaggcgtcgaccgcccggcgatcgccgtgcgcatgagcttctcgggcgaaggc
cgcaagatcggccatacctttcatcgcatcatgatgaagagtgccgccaagctctcctat
cagcaggcgcaggcggcgatcgacggaagaccggatgatcagaccggaccgatgctcgag
ccgatcctgaaaccgctctggcacgcttatggagtaatgaagcgcggacgcgaccggcgc
cagccgctggaactcgacatgccggagcgcaagatcctgctgaaaccggacggcacggtc
gaccgggtcttcgtgccgccgcggctcgatgcgcacaagctgatcgaagagatgatgatt
caggcgaatgtctgcgccgccgagacgctcgagaagaagcgtcagccgctggtctaccgc
attcatgacggcccgacgcttgccaagcaggaagtcttgcgcgagttcctggcgacactc
ggcatctcgctcgccaagggcggcaatatgcgcgccaacagcttcaacggcatccttgcc
aaggcggacggcacggcacaccagaccatggtcaatgagatggtgctgcgctcgcagagt
caggcgatctacagccccgagaatatcggccatttcggtctcaacctgatgaagtacgcc
cacttcacctcgccgatccgccgctacgccgatctcatcgtgcatcgggcgctggtcggt
tcgctcggcttcggcgaaggcggcatcacccccgacgaagaagcctcgctcgacgatatc
gccgccgaaatctcgaccttcgagcgccgggcgatggcggccgagcgcgagaccatcgac
cggctgatcgctcatcatttgagcacccgcgtcggcgaggagtttgccggccgcgtctcc
ggagttacgaaatccgggctctttattaccttgccggactatggcgccgacggtttcgtt
cctatatctacgctcgggaccgattatttcatctatgacgaggcgcatcaggcactgtcg
ggtgaaaagacgggcctcggctatcgtcttggcgacagcgtcacagtgaagcttgcggaa
gcaattccgctggccggcgcgctgcgtttcgagatgctgagcgaaggacgcgagatgccg
acggcggtgcgttccttccataaggccggccgccgcgacaggggacaggtccgcaagaaa
ccgggaacgcgtcccccgcgcgggcgccgctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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