KEGG   Rhizobium sp. N731: AMK02_CH01945
Entry
AMK02_CH01945     CDS       T04809                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rhx  Rhizobium sp. N731
Pathway
rhx03410  Base excision repair
rhx03430  Mismatch repair
rhx03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rhx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AMK02_CH01945 (recJ)
   03430 Mismatch repair
    AMK02_CH01945 (recJ)
   03440 Homologous recombination
    AMK02_CH01945 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rhx03400]
    AMK02_CH01945 (recJ)
DNA repair and recombination proteins [BR:rhx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     AMK02_CH01945 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     AMK02_CH01945 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      AMK02_CH01945 (recJ)
SSDB
Motif
Pfam: DHH DHHA1 RecJ_OB
Other DBs
NCBI-ProteinID: ANK85537
Position
1929033..1930835
AA seq 600 aa
MADLVDPVQRAFLGVEKSALDNRWVARLDQAGQNRALAMAQVHGLPDLIARVLAGRGVPV
DEAIEFLDPTIRGLMPDPHTLTDCEKAATRLVRAIERGESVAIFGDYDVDGAASSALMFR
FLSHFGVKANIYIPDRIFEGYGPNPAAINQLIDNGARLIVTVDCGSTSHDALAAAAARNI
DVVVIDHHQVTHELPPCHALVNPNREDDLSGQGHLCAAGVVFMVLVATLRLLRAAGNKHI
LALDLLQWLDIVALATVCDVVPLKGLNRAYVVKGLVAARHQSNAGLAALFRKAGLAGPVT
PYHFGFLIGPRINAGGRIGDAALGSRLLTLDDAGEAEVIAQRLDELNRERQAMEAMMLQE
AEAEALAEYGDGEGASVIVTAHEKWHPGIVGLIAARLKEKFKRPAFAIAFDPSGRGTGSG
RSINGFDMGRMVRAAVEEGILVKGGGHAMAAGLTVERADLGRLRTFFTEKAARTVASLVA
NETLKIDGAIGASGATLELIDRLEAAGPYGSGHAQPLFAVPAHRVRDARLVGEKHVKVTL
EAMDGSRLDGIAFRAADTGLGNLLINSRGASLHVAGWLGAEHYQGARRIQLRVCDAAPAR
NT seq 1803 nt   +upstreamnt  +downstreamnt
atggcagatctcgtcgatccggtacagcgcgcgtttcttggcgtggagaaatccgcactc
gacaatcgctgggttgcaagactcgaccaggccggccagaaccgggcgctcgccatggcg
caggttcacgggctgccggatctgatcgcccgggttctcgcaggacgcggcgtcccggtt
gacgaagcgatcgaattcctcgatccgacaatccgcggcctgatgcccgatccccacaca
ctgaccgattgcgagaaggcggcaacccgcctcgtgcgtgcgatcgagcgcggcgaaagc
gtggcgattttcggcgattatgatgtcgacggggcggcctcctcggcgctgatgttccgc
tttctcagccatttcggggtcaaggcgaacatctacattcccgaccgcatctttgaaggt
tatggccccaatccggcggcgatcaaccagctgatcgacaatggcgccaggctgatcgtc
accgtcgattgcggctccaccagtcacgacgcgcttgccgccgctgctgcgcgcaatatc
gatgtcgtcgtcatcgatcaccaccaggtgacacatgagctgccgccctgccatgcgctc
gtcaatcccaatcgcgaggacgatctgtcggggcaggggcatctttgcgcggccggcgtc
gtcttcatggtgctggtcgcgacattgcggctgctgcgcgcggccggcaacaaacacatc
ttggcgctcgacctgctgcaatggcttgacatcgtggcgcttgcgacggtctgtgatgtc
gtgccgctgaaggggctcaatcgcgcctatgtggtcaaggggctggttgctgcccggcac
cagagcaatgccgggcttgccgcactcttccgcaaggcggggctcgcaggccccgtgacg
ccttatcatttcggctttctgatcggcccgcgcatcaatgccggtggacggattggtgac
gccgcacttggaagccgcctgctgacgctcgatgatgccggcgaggcggaggtgatcgcg
cagcgcctcgacgagctcaaccgtgaacgccaggcgatggaggcgatgatgctgcaggag
gcggaagccgaggcgcttgccgaatacggcgacggcgagggcgcctccgtcatcgtcacc
gcccatgagaagtggcatccaggcatcgtcgggctgatcgccgcgcggctgaaggagaaa
ttcaaacggcccgccttcgcgatcgctttcgatccctccggccgcggcaccggctcaggc
cgctccatcaatggcttcgacatgggcaggatggtgcgggctgcggtcgaggagggcatc
ctggtcaagggcggcggccatgccatggcggcggggctgacggtcgagcgcgccgacctc
ggcaggttgagaaccttctttaccgagaaggccgcacggacagtggcgagcctcgtcgcc
aacgagacattgaagatcgatggcgcaatcggcgcaagcggcgccacgcttgaactcatt
gaccgcctggaagccgccggcccctatggctccggccacgcccagccgctttttgcggta
ccggcgcatcgggtacgagatgcgcgcctggtcggcgagaaacatgtgaaggtgacgctg
gaggcgatggacgggtcgcggctcgatggaatcgccttccgcgccgccgataccggcctc
ggcaatcttctcatcaattcacgcggcgcgagcctccatgtcgcaggctggctcggcgcc
gaacattatcaaggcgcgcgccgcatccagctgcgcgtctgcgacgcagcgccagcgaga
tag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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