KEGG   Rhodoferax koreense: RD110_12380
Entry
RD110_12380       CDS       T04721                                 
Name
(GenBank) RNA pseudouridine synthase
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
rhy  Rhodoferax koreense
Brite
KEGG Orthology (KO) [BR:rhy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rhy03009]
    RD110_12380
   03016 Transfer RNA biogenesis [BR:rhy03016]
    RD110_12380
Enzymes [BR:rhy01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     RD110_12380
    5.4.99.29  23S rRNA pseudouridine746 synthase
     RD110_12380
Ribosome biogenesis [BR:rhy03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    RD110_12380
Transfer RNA biogenesis [BR:rhy03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    RD110_12380
SSDB
Motif
Pfam: PseudoU_synth_2 Gig2-like
Other DBs
NCBI-ProteinID: APW40654
UniProt: A0A1P8K3R0
Position
complement(2630983..2631639)
AA seq 218 aa
MPAVAPGTEVLFADDALIVLRKPSGLLAVPGRGADKQDCLSLRVQQMYPDALVVHRLDMA
TSGLMLMARGAAVQRLLNAAFAGREVHKRYTAVVAGDLPKWDDWREIDLPIRVDWPRRPL
RIIDALQGKPSITRWRGLPEGAGDRPGTTRVELQPVTGRSHQLRVHLQALGHPILGDRLY
ASPEIQALSDRLLLHACALRLPHPVTGEPLAFEDLAPF
NT seq 657 nt   +upstreamnt  +downstreamnt
gtgccggccgtcgcgccaggtaccgaggtgttgttcgccgacgacgcgttgatcgtgctg
cgcaaaccctcgggcctcctggccgtgcccggccgaggcgccgacaagcaggactgcctg
agcctgcgcgtgcagcagatgtacccagacgcactcgtggtgcaccggctcgacatggcc
acctcgggcctgatgctgatggcgcgcggcgcagccgtgcagcgcctgctcaacgcagcc
ttcgccgggcgcgaggtccacaaacgctacacggccgtggtggccggcgacctgcccaaa
tgggatgactggcgggagatcgacctgcccatccgcgtcgactggccaaggcggccgctg
cgcatcatcgacgccttgcagggcaagcccagcatcacgcgctggcgcggcctgcccgag
ggcgccggcgatcggccgggcaccacacgcgtcgagctccagcccgtcaccggccggtct
caccagctgcgtgttcacctgcaggcgctgggccatccgatcctgggcgaccggctgtat
gcgtctcccgaaatccaggccttgtcggaccgactgctgctgcacgcctgcgcgctcagg
ttgccgcatcccgtcaccggcgagcccctggccttcgaagacctggcgccgttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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