KEGG   Candidatus Riesia pediculicola: RIEPE_0084
Entry
RIEPE_0084        CDS       T01218                                 
Name
(GenBank) DNA polymerase III, delta subunit superfamily
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
rip  Candidatus Riesia pediculicola
Pathway
rip03030  DNA replication
rip03430  Mismatch repair
rip03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rip00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RIEPE_0084
   03430 Mismatch repair
    RIEPE_0084
   03440 Homologous recombination
    RIEPE_0084
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rip03032]
    RIEPE_0084
   03400 DNA repair and recombination proteins [BR:rip03400]
    RIEPE_0084
Enzymes [BR:rip01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RIEPE_0084
DNA replication proteins [BR:rip03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     RIEPE_0084
DNA repair and recombination proteins [BR:rip03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     RIEPE_0084
SSDB
Motif
Pfam: DNA_pol3_delt_C DUF2023
Other DBs
NCBI-ProteinID: ADD79845
UniProt: D4G7P5
Position
76208..77242
AA seq 344 aa
MNIIYPENISKNLKNKISRNYFLFGENLFLIRKSIKSILRILSPKNIYEIKRFRLISEID
LKKIIEYLSFQNLFYTGKIIIINVLNESFFLSSLENLINRSSPSWNQNLILIMIFKRLYM
ARKIRSRFESFTKIHQEKIIDCSEPNRSRLFKIVKHQMESRSIWLDLESIDFILDQVKDL
TKIERIFRKLSNFFLNKTITINQIKNFLRNEVSRSISEEDIIYELLLGKIEKTWRKVESL
KKKENDIFKLIKSIQNRLILLFFLKYETIKESSTFFISERVNRRFQEKYESYIKKIDQNF
ILSLMKVIARSELFLKNNDQEMIWLELERIIILFANQKRSKNDT
NT seq 1035 nt   +upstreamnt  +downstreamnt
ttgaacattatttacccggaaaatatttccaaaaatctaaaaaataaaatttcccgaaat
tactttttatttggagaaaatttatttttaattcggaaatctatcaaaagcatcttaaga
attttatcccctaaaaatatttacgaaattaaaaggttccgtcttatttctgaaattgat
ttgaaaaagataatagaatatctttcttttcaaaatcttttttatactggaaaaattatt
ataataaatgttttaaatgagagtttttttttaagttctctggaaaatttgataaatcga
tcttcaccctcttggaaccaaaatctgatattgataatgattttcaagagattatacatg
gctcgaaaaataaggtcaagatttgaaagtttcactaagattcatcaagaaaaaatcatt
gattgttccgaaccaaaccgatcgagactcttcaaaattgtaaaacatcagatggaatca
agatccatttggctagacctagaatcgattgattttattttagatcaagtaaaagatcta
acaaaaatagaaagaatttttagaaaactttcaaacttttttttgaataaaaccataacg
atcaatcaaatcaaaaatttcttaagaaatgaagttagtcgaagcatatcagaagaagat
ataatatatgagttattgcttggaaaaatcgaaaaaacttggagaaaagttgagtcttta
aaaaagaaagaaaacgacatttttaaattgatcaaatctattcagaataggttaatattg
ctattttttctaaagtatgagacgatcaaagagagttccacattttttatttcggaaaga
gttaatagaagatttcaagaaaaatacgaaagttatatcaaaaaaatagatcagaatttt
attctgtcattgatgaaagttattgcaagatcggaactttttctaaaaaacaatgatcaa
gaaatgatttggttagaattggaaagaatcatcatattatttgctaatcaaaaacgatca
aaaaatgatacgtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (32)   

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