KEGG   Agrobacterium pusense IRBG74: BN877_I1143
Entry
BN877_I1143       CDS       T02867                                 
Symbol
rnd
Name
(GenBank) Ribonuclease D (RNase D)
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
rir  Agrobacterium pusense IRBG74
Brite
KEGG Orthology (KO) [BR:rir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rir03016]
    BN877_I1143 (rnd)
Enzymes [BR:rir01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     BN877_I1143 (rnd)
Transfer RNA biogenesis [BR:rir03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    BN877_I1143 (rnd)
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC
Other DBs
NCBI-ProteinID: CDI08053
UniProt: U4PSD3
Position
complement(1119204..1120364)
AA seq 386 aa
MIETTAALAEACTELAKSEFITIDTEFLRETTFWPELCLVQMASPTLEVLVDPLAKGLDL
TPLFELMANPDVVKVFHAARQDIEIIYHLGGLIPHPIFDTQVAAMVCGFGDSISYDQLVQ
KIKNVQIDKSSRFTDWSRRPLTEKQLDYALADVTHLRDVYLSLKAQLEREGRSLWLTEEM
DILESRDTYDMHPDDAWLRLKSRLRKPTELAILKFVAAWREREARSRNVPRSRVLKDDAI
FEIAQQQPKDAEALSRLRTIPKGWERSASGNAIVETVNAALALPKEEMPKAPRHSHAPEG
SGAAVELLKVLLKLTADKHGVAAKVIANSDDLDKIAAEGEKATVAALTGWRRELFGNVAL
KLINGEVALRFAGKRVEAVEVAANES
NT seq 1161 nt   +upstreamnt  +downstreamnt
atgattgaaacgactgccgccctcgccgaggcttgcacggaactggcgaaatcggaattc
atcaccatcgacaccgaatttttgcgggaaaccaccttctggccggaactctgcctcgtg
cagatggcaagcccgactctcgaggtgctggtcgatccgctggcgaagggcctcgatctt
acgccgcttttcgagttgatggcaaatcccgacgtcgtgaaggttttccacgcggcgcga
caggacatcgaaatcatctaccatctcggcgggcttattccgcatccgatcttcgacacg
caggtcgccgccatggtctgcggtttcggcgattcgatctcatacgaccagctggttcag
aagatcaaaaacgtgcagatcgacaaatcctcgcgtttcaccgactggagccgccgcccg
ctgaccgaaaagcagctggattacgcgctggccgacgtgacccatctgcgggatgtctat
ctctcgctgaaagcccagctcgagcgtgaaggccgctcgctgtggctgaccgaagagatg
gatattctcgagtctcgcgacacgtatgacatgcatcccgacgatgcctggctgcggctg
aaatcgcgcctgcgcaagccgaccgagcttgccatcctgaaattcgtcgccgcctggcgc
gagcgggaggcgcgctcccgcaacgtgcctcgctcgcgcgtgctgaaagacgatgcgatc
ttcgaaatcgcccagcagcagccaaaggatgccgaggcgctgtcgcggcttcgcaccatt
cccaagggctgggaacgctccgcgtccggcaacgccatcgtcgagacggtgaatgcggcg
ctggcgctgccgaaagaagaaatgccgaaggcaccgcgtcacagccacgcgccggaaggt
tcgggcgctgccgtggaactgttgaaggttctgctgaagctgacagctgacaagcacggc
gtcgccgccaaggtcatcgccaatagcgacgatctggacaagatcgccgccgagggcgaa
aaggcaacggtggcggcactgaccggttggcggcgggagcttttcggcaatgtggcgcta
aagctcatcaatggtgaggtcgccctgcgttttgccggcaagagggtcgaggctgtagag
gttgcggcgaacgagtcgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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