KEGG   Agrobacterium pusense IRBG74: BN877_I2021
Entry
BN877_I2021       CDS       T02867                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha chain
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
rir  Agrobacterium pusense IRBG74
Pathway
rir03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:rir00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BN877_I2021 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rir03021]
    BN877_I2021 (rpoA)
   03400 DNA repair and recombination proteins [BR:rir03400]
    BN877_I2021 (rpoA)
Enzymes [BR:rir01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BN877_I2021 (rpoA)
Transcription machinery [BR:rir03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BN877_I2021 (rpoA)
DNA repair and recombination proteins [BR:rir03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BN877_I2021 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L DUF211
Other DBs
NCBI-ProteinID: CDI08914
UniProt: A0A1L9CSU7
Position
complement(1923728..1924738)
AA seq 336 aa
MIQKNWQELIKPNKVEFTSSSRTKATLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAV
QIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDSKRMVVRKQGPGAVTAGDIQTVG
DIEILNPDHVICTLDDGAEIRMEFTVNNGKGYVPAERNRAEDAPIGLIPVDSLYSPVKKV
SYKVENTREGQVLDYDKLIMTIETNGSVSGEDAVAFAARILQDQLGVFVNFDEPQKEAEE
ESVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLN
EIKEVLASMGLHLGMEVPAWPPENIEDLAKRYEDQY
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgattcagaagaactggcaggaacttatcaagccgaacaaggtcgagttcacctcgtcc
agccgcaccaaggcaacgctcgttgccgagccgctggagcgtggtttcggtcttaccctc
ggcaacgcgctgcgtcgcgttctgttgtcttctctgcgcggcgccgctgttacggccgtg
cagatcgacggtgtcctgcacgaattctcctccatccccggcgtccgggaagatgtgacg
gatatcgtgctcaacatcaaggaaatcgccatcaagatggatggcgacgattccaagcgc
atggtcgtgcgcaagcagggcccgggtgccgtaaccgctggtgacatccagacggttggc
gacatcgagatcctgaaccccgaccacgtgatctgcacgctcgacgatggcgctgaaatc
cgcatggaattcaccgtcaacaacggcaagggttacgtaccggctgagcgcaaccgcgcg
gaagatgccccgattggcctcattccggtggacagcctctattctccggtcaagaaagtg
tcctacaaggttgaaaacacccgtgaaggccaggttctcgactatgacaagctgatcatg
acgatcgagaccaacggttcggtttccggcgaagacgccgttgccttcgccgctcgcatt
cttcaggaccagctgggcgtcttcgtcaacttcgacgagccgcagaaggaagcagaagaa
gaatcggttacggaactcgcgttcaacccggcgcttctcaagaaggtcgacgagctcgag
ctgtcggttcgttcggcaaactgcctgaagaacgacaacatcgtttacatcggcgacctg
atccagaagaccgaagccgaaatgctccgcacgccgaactttggtcgcaagtcgctgaac
gaaatcaaggaagttctcgcttccatgggtctgcacctcggcatggaagtgccggcatgg
ccgcctgagaacatcgaagatctcgcaaagcgttacgaagaccagtactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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