KEGG T02364: Riv7116

Rivularia sp. PCC 7116: Riv7116_5709

Entry

Riv7116_5709 CDS T02364

Definition

PAS domain-containing protein

Orthology

K13924

two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]

Organism

riv Rivularia sp. PCC 7116

Pathway

riv02020	Two-component system
riv02030	Bacterial chemotaxis

Class

Environmental Information Processing; Signal transduction; Two-component system [PATH:riv02020]
Cellular Processes; Cell motility; Bacterial chemotaxis [PATH:riv02030]

SSDB

Motif

Pfam:

CheB_methylest CheR HATPase_c Response_reg PAS_10 HisKA PAS_4 PAS_9 HATPase_c_3 CheR_N IncA CENP-F_leu_zip APG6

Other DBs

NCBI-GI:

427739079

NCBI-GeneID:

14069391

UniProt:

K9RKM7

Position

complement(7191778..7195854)

AA seq 1358 aa
MTNPSSESRDFFIIGIGASAGGVQALEAFFSNLPDHPSAAFVIIQHLSPDYKSMMAEIIQ
RKTQLPVHEIVDGVKIEPSHAYVLPPGKLVIIKDGQLRLQKRNRSFGYPVNKFFKSAAQD
WGEKVVGIVLSGTGNDGTEGLKAISQWGGIGLVQSPETAQFNSMPSSAIPSGLVDEILSP
QDLARTVFELISFSQKNPSISPQDITLIDTDILQQILNILAENEEIDFSHYKISTLARRI
HRRCALTSSINLENYTALLETSEEEQKLLRQDLLIGATCFFRDRPAWEYLQQHVLPQITA
QIEPQQHLRIWVSACATGEEAYTMAMLVNEAVEKSGKTLHVKVFATDVDTNALENAARGS
YPESIIHDISPYLLEKYFVRNGDRYQVKHFLREMLIIAPHDLTKNAGFSKMHLVSCRNVL
IYMQPHLQQQVLRLLHFAIAPQGILFAGSSETLGDLNEEFVPLDSKWKIFRKKRDIPLSL
APLSRQPIITPIPANARTKTRQNQFDRVLGEVFKQCLGERQLTCVLVNGENQMVRVFHNS
ARLLDYPLGEAMLDITEIVHPALRLPLSTALHRAKRDKKEVLYTGIKLKRDELEENVSLK
VGLDSTNISIEELFIIVLEIETQLSITKTPSLRFEIDTEAAQQINELEYELQQTRENLQV
TIEELETTNEEQQATNEELLASNEELQSTNEELQSVNEELYTINAEYQSKIQELTQLNND
IDNLLRSTDIGVVFLDCQLNIRKFTPAATRAINIRANDVERPLAHFTHNLDCPNLIEILQ
QVVDTGEATEHEVSISQSSEKLLMRVNLYLREDGRNDGIVLTFVNINELKKVQQQLHQAN
VLLENLYVTSPVGLSLHDQDLRYLRVNKTLADINGISISEHIGKTVAEISSDLAQAIEPS
LKNVSETGRAICDVEITGKTIQKPDIERCWTASYYPVKLLDGTRGVGTVITEITDRKRTQ
QELLRQNQALEDAIAVAQAADSANQAKSEFLANVSHEIRTPMNAVLGVSQLLQYTELSSR
QSGLLIKLRSNGERLLEIINDVLDLSKIEARELRLNRNNFNIDKLGDNLLHLFAIQAEEK
GIQFTINIAPDMPKNLIGDDFRLQQVLSNLIGNAIKFTDNGEVSVHISSETQDTFQNSVK
LHFRVSDTGIGIDPEVKENLFKPFTQADGSTTRKYGGTGLGLTICRRIIDLMGGEIAVQS
NPGEGATFWFTVSLDRSETEVESDLQSTATIIDSSSAKNLKILIVEDYVDSREIVVFMLE
ELGYQAEAVSNGEQALDKLAESDFDIVFMDCQMPVMDGYEATRQLRQREGEQRHTLIIGL
TANAMYDDREKCLNAGMDNYLSKPVMMENLERIINNYQ

NT seq 4077 nt +upstreamnt +downstreamnt
atgactaatccatcctctgagtctagagatttttttatcatcggtattggagcttctgct
ggaggagtacaggctttagaagcattttttagcaatttaccagatcatccttctgctgct
tttgtaatcattcagcatttgtctcctgactataaaagcatgatggcagaaataattcaa
aggaaaactcaactgccggtacatgagattgtagatggagtcaaaattgaaccaagtcat
gcttacgttttaccaccaggtaaactcgtaattatcaaagacggacaattacgtttacaa
aaaagaaatcgttcttttggttatcccgtgaataaattttttaaatccgcagcccaagac
tggggtgaaaaagttgtgggaattgtgttgtcgggaacgggaaatgatggtaccgagggt
ttaaaagcaattagccaatgggggggaattggcttggtgcagtctccagaaactgctcaa
tttaactctatgcccagtagcgcaattcctagcggtttagtcgatgaaattctttctccc
caggatttagcccgtactgtttttgaattaattagcttttcacaaaaaaatccttctatc
tcaccgcaagatattactttaattgataccgatatattacagcaaatattaaatatcctt
gccgaaaacgaagaaattgatttttcgcattataaaattagtactcttgccagaagaata
catcgacgttgcgccttaactagcagcattaatctggaaaactatactgctttattagaa
acttcagaagaagagcaaaaattattacgtcaagatttgctaatcggtgctacctgcttt
tttagagatcgtcctgcatgggaatatttacaacagcatgttttaccgcaaattactgcc
caaatagagccgcagcaacatctaagaatttgggtatcggcttgtgccaccggggaagaa
gcctacacaatggcgatgctggtaaacgaagccgtagaaaaaagcggtaaaacattacat
gtaaaagtatttgctaccgacgtagatactaatgccctagaaaatgcagccagaggtagc
tatcctgaaagcatcattcatgatatttctccttaccttttagaaaaatattttgtccgt
aacggcgatcgctatcaagtaaagcattttttgcgagaaatgctaattatcgcaccgcac
gatttaaccaagaatgctggtttttctaaaatgcatctggttagctgtcgcaacgtatta
atttacatgcagccgcatctacagcagcaagtattgcgactgctacattttgctattgct
cctcaaggtatcttatttgcaggtagttccgaaactttaggagatttaaatgaagaattt
gttccactcgattccaaatggaaaatttttcgcaaaaaaagagatattcccttatcttta
gcacctttatcgcgacaacctataattacaccaatccctgccaacgctagaacaaaaacc
agacaaaatcaattcgatcgggtattgggggaagtatttaagcaatgtttgggtgaaaga
caactaacctgcgtgctggttaatggcgaaaatcaaatggtaagggtatttcataactca
gcccggttactagattatccgctaggtgaagcgatgttagatatcaccgaaattgttcat
cccgctttaagattacctttatctacagcattacaccgcgctaaacgcgataaaaaagaa
gttttatataccggaatcaaactcaaacgagatgaattagaagaaaacgttagcttaaaa
gtaggtttagatagcacaaatatttctattgaggaattgtttattattgtattagaaatt
gaaacccaattatctataacaaaaactccatcactgcgttttgaaattgataccgaagca
gcacagcaaatcaacgaacttgaatacgaattgcagcaaactcgggaaaatcttcaagtt
accatcgaagaacttgaaaccaccaacgaagaacagcaagccactaacgaagaacttcta
gcttctaatgaagaattgcaaagtaccaacgaagaactacagtcagttaacgaagaatta
tatacaataaatgccgaataccaatcaaaaattcaagaattaactcaacttaataacgat
attgataatttactgcgctcaaccgatattggtgtagtatttctagattgtcagctaaat
attcgtaaatttacacccgcagcaacccgcgctataaatattagagcaaacgatgttgaa
cgtcctttagcgcattttacccataatttagattgtcctaatttaattgaaattctccaa
caagttgtagataccggagaagcaaccgaacatgaagtcagtatttctcagagttccgaa
aaactgttgatgcgagtcaatttgtatcttcgggaagatggtagaaacgacggaatagtg
ctgacatttgtcaatatcaacgaactcaaaaaagtacagcagcagctacatcaagctaat
gttttattagagaatttatacgttacaagtcccgtaggtttgagtttacacgaccaagat
ttaagatatttacgagttaacaaaactttagccgatatcaacggtatatctatttccgag
catattggtaagacagtggcggaaatatcatctgacttagcgcaagcaatagaaccaagt
ttaaaaaatgtcagtgaaacgggtagggcaatttgcgatgtcgaaattacgggtaaaaca
atacagaaacccgatatagaaagatgttggactgctagttattatcctgtaaaattgctt
gatggtactcgcggagtcggaaccgtaattacagaaattaccgatagaaagcgtactcaa
caagaattattgcgtcaaaatcaagccttagaagatgcgatcgctgtagctcaagcggca
gattcagccaatcaagctaaaagtgaatttctagcaaatgtcagccacgaaatccgcacg
ccgatgaatgcagtattaggagtcagtcaattattacagtacaccgaattaagttccaga
caaagtggcttgttaataaaactcagaagtaatggtgaaagattattagaaataatcaac
gatgttctcgatctatccaaaattgaagctagggaactacggttaaaccgaaacaacttt
aatatagataaattaggcgataacttacttcacttgtttgccattcaagcagaagaaaaa
ggcattcaattcacaataaatattgcacctgatatgccaaaaaacttaattggcgatgat
tttcgcttgcaacaggtattgagtaatttaatcggcaacgccatcaagtttaccgataat
ggagaagtctcagttcatatcagtagcgaaactcaagatacttttcaaaattcagtaaaa
ctgcattttagagttagcgatactggtatcggtattgacccagaagttaaagaaaatctg
tttaaaccatttacccaagccgatggttccacaacccgtaaatatggcggtacgggattg
ggattaactatttgcaggcggattatagacttaatgggtggagaaatcgccgtccaaagt
aatcctggagaaggtgcaacattttggtttacagttagcttagatagatcggaaaccgag
gttgaatctgacttacaatcaaccgccacaatcatcgattcttcatcagctaaaaacctc
aaaatattaatagtagaagattatgttgatagtcgcgaaatagtagttttcatgttagaa
gaattgggatatcaagcagaagccgttagcaacggagaacaagcactcgataaattagcc
gaaagcgattttgatatagtttttatggactgccaaatgccagtcatggacggttacgaa
gccactcgtcaattgcgtcaacgtgaaggagaacagcgtcataccttaattatcggctta
accgccaatgccatgtatgacgatagggaaaaatgtttaaatgcgggaatggataattat
ttaagtaagccagtgatgatggagaatttagagagaattattaataattatcaatga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (24)   

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