KEGG   Roseburia intestinalis XB6B4: RO1_12730
Entry
RO1_12730         CDS       T02597                                 
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
rix  Roseburia intestinalis XB6B4
Pathway
rix03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rix00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    RO1_12730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rix03400]
    RO1_12730
Enzymes [BR:rix01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     RO1_12730
DNA repair and recombination proteins [BR:rix03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     RO1_12730
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Other DBs
NCBI-ProteinID: CBL11906
UniProt: D4KX16
Position
complement(1274617..1275387)
AA seq 256 aa
MENTMKLISWNVNGLRACIQKGFLDFFHETDADIFCIQESKLQEGQIDLPLPGYFSYWNY
AKKKGYSGTAIFTKKEPLNVTYGIGIEEHDKEGRVITLEYPDFYMVTCYTPNSQNELARL
PYRMQWEDDFRAYLKRLDGSKPVILCGDLNVAHEEIDLKNPKTNRKNAGFSDEEREKMTK
LLDAGFTDTFRYFYPDTEQIYSWWSYRFRAREKNAGWRIDYFITSKRMNDKLTGAKIHTD
VFGSDHCPVELDIDLS
NT seq 771 nt   +upstreamnt  +downstreamnt
atggagaatactatgaaactgatttcctggaatgtcaacggactgcgtgcctgtatccaa
aaaggctttcttgatttttttcatgaaactgatgcagatattttctgtattcaggaatcc
aagctgcaggagggacagatcgaccttcctctgcccggttatttttcctactggaattat
gccaagaaaaaaggttactccggcacagcgatttttacaaaaaaagagcctctgaatgtg
acttacggtatcggcattgaagaacacgacaaagaaggacgtgtcatcaccttagaatac
cctgatttttacatggttacctgttatacgccaaattctcaaaacgaactggccagactg
ccttaccgcatgcagtgggaagatgattttcgtgcttatttaaaaagactcgatggatcc
aagcctgtcattctctgtggggacttaaatgttgcacatgaggagatcgatttaaagaat
ccaaaaaccaaccggaagaacgccggattttcggatgaagaacgtgaaaaaatgacaaag
cttctcgatgccggcttcacagacaccttccgctatttttacccggatacagaacagatc
tattcctggtggtcctaccgttttagggcacgggaaaagaatgccggatggcgtattgac
tattttatcacttccaaacggatgaatgataagctgaccggcgcaaagatccacacggat
gttttcggatctgaccactgcccggtggaattagatattgacctgtcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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