KEGG   Roseburia intestinalis XB6B4: RO1_17450
Entry
RO1_17450         CDS       T02597                                 
Name
(GenBank) seryl-tRNA synthetase
  KO
K01875  seryl-tRNA synthetase [EC:6.1.1.11]
Organism
rix  Roseburia intestinalis XB6B4
Pathway
rix00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:rix00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    RO1_17450
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:rix01007]
    RO1_17450
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rix03016]
    RO1_17450
Enzymes [BR:rix01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.11  serine---tRNA ligase
     RO1_17450
Amino acid related enzymes [BR:rix01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   RO1_17450
Transfer RNA biogenesis [BR:rix03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    RO1_17450
 Prokaryotic type
    RO1_17450
SSDB
Motif
Pfam: tRNA-synt_2b Seryl_tRNA_N tRNA-synt_2 DUF4201 Scaffolding_pro FapA WXG100 Spidroin_N DUF3450 DUF2229 ERM_helical CATRA-C DUF2205
Other DBs
NCBI-ProteinID: CBL12315
UniProt: D4KY75
Position
1749594..1750883
AA seq 429 aa
MIDLKFLRENPEVVKQNIKNKFQDHKLPLVDEVIELDAKARAVQQEADDLRASRNKLSKQ
IGQLMGQGKKDEAEAVKAQVNANAARLAELEEQEKELQEKVTRIMMTIPNIIDPSVPIGK
DDSCNVEIEKFGDPVVPDFEIPYHTDIMERFNGIDLDAAGKVAGNGFYYLMGDIARLHSA
VISYARDFMIDRGFTYVIPPFMIRSNVVTGVMSFDEMDAMMYKIEGEDLYLIGTSEHSMI
GKFIDTINDEEKLPYTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEESKT
WYDKLWQNTVDLFRSLDIPVRTLECCSGDLADLKVKSCDVEAWSPRQKKYFEVGSCSNLG
DAQARRLKIRVKGSDGNKYFAHTLNNTVVAPPRMLIAFLENNLNEDGSVNVPKALQPYMG
GKEKLVPLK
NT seq 1290 nt   +upstreamnt  +downstreamnt
atgatcgatttaaaatttttaagagagaatccggaagttgtaaaacagaacattaaaaat
aagtttcaggatcacaaacttccgttagtagatgaggtaattgaacttgatgcaaaggca
agagctgtacagcaggaagcagacgatttgcgtgcaagcagaaataaactgtcaaaacag
atcggacagctgatggggcagggaaaaaaagatgaggcagaggcagtaaaagcacaggta
aatgccaatgcagcacgtcttgcagagttagaggagcaggaaaaagaactgcaggagaaa
gtaaccaggatcatgatgacgatcccgaacatcatcgatccgtccgtaccgatcggaaaa
gatgacagctgcaatgtagagatcgaaaaatttggcgatccggtcgtaccggatttcgag
atcccatatcacacagacatcatggagcgtttcaatggtattgatcttgatgcggcagga
aaagttgcaggaaacggtttctattatctgatgggtgatatcgcgcgccttcattctgca
gtgatttcctatgcgcgtgatttcatgatcgaccgtggatttacttatgtcattccgccg
tttatgatccgaagcaacgttgttacgggcgttatgagctttgacgagatggatgcgatg
atgtacaagatcgagggcgaggatctctatctgatcggtacttccgaacattccatgatc
ggtaaattcatcgacacgattaacgacgaagaaaaacttccatacacactgacttcctac
tctccatgtttccgtaaagagaaaggtgcacacggtatcgaggagcgtggtgtataccgt
atccaccagttcgagaaacaggagatgatcgtggtctgcaaaccggaagaatctaagacg
tggtatgataaattatggcagaacacggtagacttattccgcagtctggatatcccggtt
cgtactttagagtgctgctccggtgaccttgctgacttaaaggtaaaatcctgtgatgtt
gaggcatggtctccaagacagaagaaatactttgaggtcggaagctgctcgaacttagga
gatgcacaggcaagacgtttaaagatccgtgtgaaaggttccgatggaaacaaatatttt
gcacataccttaaacaacacggttgttgcaccgcctagaatgctgatcgcatttttagag
aacaacttaaatgaggacggaagcgtcaatgtaccgaaggcattacagccgtacatgggc
ggaaaagagaaactggttcctttgaaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (34)   

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