KEGG T00402: RL0059

Rhizobium johnstonii: RL0059

Entry

RL0059            CDS       T00402

Symbol

helO

Name

(GenBank) putative ATP-dependent helicase protein

K03579

ATP-dependent helicase HrpB [EC:5.6.2.6]

Organism

rle Rhizobium johnstonii

Brite

KEGG Orthology (KO) [BR:rle00001]
09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    RL0059 (helO)
Enzymes [BR:rle01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     RL0059 (helO)

SSDB

Motif

Pfam:

HrpB_C Helicase_C DEAD HA2_N ResIII AAA_30 Flavi_DEAD AAA_19 nSTAND3 AAA_22

Other DBs

NCBI-ProteinID:

CAK05547

RhizoBase:

RL0059

UniProt:

Q1MNA5

Position

complement(59583..62048)

AA seq 821 aa
MTISASLPELPVSHVLPVVAAALEKQKRAVLSAPPGAGKTTLVPLYLLGQAWRGDGKIIL
LEPRRLAARAAASRMASLIGEQVGETVGYRMRLDNRISAATRIEVVTEGVFARMILDDPE
LTGVSVVIFDEFHERSLDADFGLALALDVQSALREDLRILVMSATLDVERVAALLDHPPV
IESLGRSFPIDIRYQDRPGGERIEDAVTRAILDAHANETGSILAFLPGQAEITRTVERLQ
GRFGAETLIAPLYGNLSQKEQDAAIRPASQGMRKIVLATSIAETSITIDGVRIVIDSGLQ
RLPVFEASTGITRLETVRVSRASADQRAGRAGRTEPGTAVRLWHQGQTAALPAFTPPQIL
SSDLSGLVLDLAHWGVQDPASLAFVDQPPETTLREARVLLGQLGALDKDGALTARGKVMR
DLALPPRLAAMVVSAGEAGQARDAAMIAVLLTEQGLGGTSVDIEERLRRFKVERGERAEA
SRRLAGRLASGLDRGAATAPALAGQLLLHAFPDRIALQRGGRGRFVMANGRGAELPETER
LAGSQMLVIADLTGRAAQARVLAAAEVTRGDIEAELPGEIKTGDQIFFDRQSRQIRARRA
TRLGAIVFEETPLPRPSGAAVTQALVEGVRELGLDQLSFSKEAVQLRERIGFLHRTIGEP
WPDVSDDALLSRLDEWFAPFQTEARGLSEISAAGLSNGLMSLVPHELQRDLSRLAPTHFE
APTGQRHPIQYEGEEPVLTIRVQELFGLKQHPAIAGGRLPLLLELTSPAHRPIQTTRDLP
GFWAGSWKDVRADMRGRYPRHPWPERPEDALPTTRAKPRGT

NT seq 2466 nt +upstreamnt +downstreamnt
gtgacaatcagtgcatccttgccggagcttccggtttcacatgtcctgccggtcgtcgct
gctgcactggaaaagcaaaaacgcgccgttctttccgccccacccggcgccggcaagacg
acgctggtgccactttacctgcttggccaggcctggcgcggcgacggcaaaatcatcctg
ctggagccacggcggctggcggcgcgggcagcggcaagccggatggcatcgctcatcggc
gaacaggtcggcgagacggtcggctaccgcatgcgcctcgacaacaggatatcggcagcg
acacggatcgaggtggtgaccgaaggggtttttgcccggatgatcctcgacgatccggaa
ctgaccggtgtctcggtggtgatcttcgacgagttccacgagcgttcgctggatgcagac
ttcggactcgctctggcgctcgacgtccagtcggcgctgcgcgaggatctgcgcatcctg
gtcatgtcggccaccctcgacgtcgaacgcgtggccgccctgctcgaccatccacctgtt
atcgaaagcctggggcgcagctttccgatcgatatccgttaccaggatcggccgggcggc
gaacgcatcgaggatgccgtgacgcgagcgatactcgatgcccatgccaacgagaccggc
tcgatcctcgccttcctgcccggccaggcggaaatcacccggaccgtcgaacgcctgcag
ggacgattcggagccgaaacactgattgcgccgctttacggcaatctcagccagaaggag
caggatgcggcgatccgaccggcatcccaggggatgcgtaagatcgtgcttgcgacatcg
atcgccgaaacatcgatcaccatcgacggtgtcaggatcgtgatcgacagcgggctgcag
cgtttgccggtgttcgaggcgtcgactgggatcacgcggctggagacggtgcgcgtgtcg
cgggcttcagccgatcagcgggccggccgtgccggacgaacggagccgggcaccgccgtc
aggctgtggcaccagggacagaccgcggcattgccggccttcaccccgccgcagatcctt
tctagcgacctctcggggctggtgctcgacctcgcgcattggggcgttcaagatccggca
tcccttgccttcgtcgatcagccgccggaaacgacgctgagggaagcgcgggtgctgctt
ggccagcttggcgcgctcgacaaggacggagcgctgacagcgcgcggcaaggtgatgcgc
gatctcgctttgccgccgcggcttgccgccatggtcgtctcggcgggagaagcggggcag
gcccgggatgcggcgatgatcgccgtgcttctcaccgaacaggggcttggcggaacgagt
gtcgatatcgaggagcggctgcgacgcttcaaggtcgagcggggcgagagagcagaggcc
tcgcggcggctggcgggacggctggcgagcggcctcgacaggggtgccgcaacagcgccg
gcgcttgcaggccaattgctgctgcatgcgttcccggatcgaatcgcgcttcagcgcggc
gggcgcggccgattcgtgatggcgaacgggcgcggagcggagctgccggaaaccgagagg
ctggccggcagccagatgctggtgattgccgacctgaccgggcgggcggcgcaggcgcgg
gttctggcggcagccgaggtgacacgcggcgacatcgaagccgagttgcccggtgagatc
aaaaccggcgaccagatattcttcgaccggcaaagccggcaaatccgggcgcggcgggca
acccggcttggcgcgatcgtcttcgaagagacgcccttgccgcgcccttccggggcagcc
gtcacccaggcgctggtggaaggggtgcgcgagctcgggctcgatcagctttccttctcg
aaggaggcggtgcagttgcgcgagcggatcggatttctgcacaggacgatcggagagccc
tggcccgatgtcagcgatgatgccctgctttcccggctcgacgagtggttcgcacccttc
cagacggaggcccgcggcctttcggagatttccgcagccgggctttcgaacggactgatg
tcgctggtaccgcacgaattgcaacgcgaccttagccggcttgcgccgacccatttcgaa
gcgccgaccggccaaaggcatccgatccaatatgagggcgaggaaccggttctgacgatc
cgcgtgcaggagctgtttggactgaagcagcatccggccattgccggtggccgcctgccg
ctgctgctcgagctcacctcgccggcgcatcggccgatccagacgacacgcgacctgccg
ggcttctgggccggctcttggaaggatgtgcgtgccgatatgcgcgggcgttatccccgg
catccctggccggagcggccggaggatgcgttgccaacgacacgggcaaaaccgcgtggt
acatga

All links

Ontology (1)   
   KEGG BRITE (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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