KEGG   Rhizobium johnstonii: RL0883
Entry
RL0883            CDS       T00402                                 
Symbol
groLch1
Name
(GenBank) putative 60 kda chaperonin (protein cpn60)
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
rle  Rhizobium johnstonii
Pathway
rle03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rle00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    RL0883 (groLch1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rle03019]
    RL0883 (groLch1)
   03110 Chaperones and folding catalysts [BR:rle03110]
    RL0883 (groLch1)
   03029 Mitochondrial biogenesis [BR:rle03029]
    RL0883 (groLch1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rle04147]
    RL0883 (groLch1)
Enzymes [BR:rle01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     RL0883 (groLch1)
Messenger RNA biogenesis [BR:rle03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     RL0883 (groLch1)
Chaperones and folding catalysts [BR:rle03110]
 Heat shock proteins
  HSP60 / Chaperonin
   RL0883 (groLch1)
Mitochondrial biogenesis [BR:rle03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    RL0883 (groLch1)
Exosome [BR:rle04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   RL0883 (groLch1)
  Exosomal proteins of other body fluids (saliva and urine)
   RL0883 (groLch1)
  Exosomal proteins of breast cancer cells
   RL0883 (groLch1)
  Exosomal proteins of colorectal cancer cells
   RL0883 (groLch1)
  Exosomal proteins of bladder cancer cells
   RL0883 (groLch1)
SSDB
Motif
Pfam: Cpn60_TCP1 CbiA
Other DBs
NCBI-ProteinID: CAK06380
RhizoBase: RL0883
UniProt: Q1MKX4
Position
complement(950963..952606)
AA seq 547 aa
MASKEIKFGRTAREKMLRGVDILADAVKVTLGPKGRNVIIDKSFGAPRITKDGVSVAKEI
ELEDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVREGNKAVAAGMNPMDLKRGI
DLAVADVVKDLQAKAKKISTSEEVAQVGTISANGDKQVGLDIAEAMQKVGNEGVITVEEA
KTAETELEVVEGMQFDRGYLSPYFVTNPEKMIADLEDVFILLHEKKLSNLQSMLPVLEAV
VQTGKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEDLGIKLESVTLDMLGRAKKVSISKENTTIVDGSGAKTDIEGRVAQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRIDDALNATRAAVQEGIVPGGGIALL
RSSTKITVKGANDDQEAGINIVRRALQSLVRQIAENAGDEASIVVGKVLDKNEDNFGYNA
QTSEYGDMIAMGIVDPLKVVRTALQNAASVASLLITTEAMIAELPKKESAGGGMPGGMGG
MGGMDMM
NT seq 1644 nt   +upstreamnt  +downstreamnt
atggcatctaaagaaatcaagtttggccgcaccgcgcgcgaaaagatgctgcgcggcgtc
gacattctcgccgatgcagtgaaggtcacgctcggcccgaagggccgtaacgtcatcatc
gacaagtccttcggcgccccgcgcatcaccaaggacggcgtctcggtcgccaaggaaatc
gaactcgaagacaagttcgaaaacatgggcgcccagatggtccgcgaagtcgcttcgaag
accaacgacatcgccggcgacggcaccacgacggctaccgttcttgcccaggcgatcgtt
cgcgaaggcaacaaggccgttgcagccggcatgaacccgatggacctgaagcgcggcatc
gacctcgctgtcgccgacgtcgtgaaggatctccaggccaaggccaagaagatctcgact
tcggaagaagttgcacaggtcggcacgatttcggcaaatggcgacaagcaggtcggtctc
gacatcgctgaagccatgcagaaggtcggcaacgaaggcgtcatcacggttgaagaagcc
aagaccgccgaaaccgaactcgaagtcgtcgaaggcatgcagttcgaccgtggctacctc
agcccctacttcgtgaccaacccggaaaagatgatcgccgacctcgaagacgtcttcatt
ctccttcacgagaagaagctctcgaacctgcagtcgatgctcccggttctcgaagccgta
gttcagaccggcaagccgctcctgatcgtcgctgaagacgtcgaaggcgaagccctcgca
acgctcgtcgtcaacaagctgcgcggtggcctgaagattgctgccgtcaaggctcctggc
ttcggcgaccgccgcaaggccatgctcgaagacatcgccatcctgacgggcggcactgtc
atctccgaagatctcggcatcaagctcgaatccgttacgctcgacatgctcggccgtgcc
aagaaggtttcgatctccaaggaaaacaccacgatcgtcgacggttcgggcgccaagacc
gacatcgaaggccgtgttgcccagatcaaggcgcagatcgaagaaaccacttcggactac
gaccgcgagaagctgcaggaacgtcttgccaagctcgctggcggcgttgccgtcatccgc
gtcggcggctcgacggaagtcgaagtgaaggaaaagaaggaccgcatcgacgacgcgctc
aacgcgacccgcgctgctgttcaggaaggtatcgtccccggcggcggtatcgctctgctc
cgctcctccacgaagatcaccgtcaagggtgcaaacgacgaccaggaagccggcatcaac
atcgttcgccgcgccctgcagtcgctcgttcgtcagatcgctgaaaacgcaggcgacgaa
gcctcgatcgttgtcggcaaggtcctcgacaagaacgaagacaacttcggctacaacgcc
cagacgtccgaatatggcgacatgatcgccatgggtatcgtcgacccgctcaaggtcgtt
cgcacggcgctgcagaacgctgcttctgtcgcatcgctgctgatcaccaccgaagccatg
attgccgaactgccgaagaaagaatcggctggcggcggcatgccgggcggcatgggcggc
atgggcggtatggacatgatgtga

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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