KEGG R.leguminosarum: RL1270

Rhizobium leguminosarum: RL1270

Entry

RL1270 CDS R.leguminosarum

Gene name betA

Definition choline dehydrogenase (EC:1.1.99.1)

Orthology K00108 choline dehydrogenase [EC:1.1.99.1]

Pathway rle00260 Glycine, serine and threonine metabolism

Class Metabolism; Amino Acid Metabolism; Glycine, serine and threonine
metabolism [PATH:rle00260]

SSDB

Motif Pfam: GMC_oxred_N GMC_oxred_C FAD_binding_2 DAO Pyr_redox_2
Lycopene_cycl F420_oxidored ApbA NAD_Gly3P_dh_N TrkA_N Thi4
PROSITE: GMC_OXRED_1 GMC_OXRED_2

Other DBs NCBI-GI: 116251037
NCBI-GeneID: 4399360
GeneDB: RL1270
RhizoBase: RL1270
UniProt: Q1MJU4

Position complement(1333279..1334928)

AA seq 549 aa
MQADFVIIGSGSAGSALAYRLSEGGKNSVIVIEAGGSDFGPFIQMPAALAWPMSMKRYNW
GYLSEPEANLNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGASGWAYADVLP
YFKRMEHSHGGEEGWRGTDGPLHVQRGGFTNPLFQAFVEAGKQAGFETTEDYNGSKQEGF
GLMEQTIFGGRRWSAANAYLKPALKRDNVKIVYGLAQRIVIEDGRATGVEIERNGRIEVV
KANREVIVSASSFNSPKLLMLSGIGPGQHLQDMGIAVKADRPGVGANLQDHMEFYFQQVS
TKPVSLYSWLPWFWQGVAGAQWLLSRGGLGASNQFEACAFLRSAPGLKQPDIQYHFLPVA
ISYDGKAAAKSHGFQVHVGYNLSKSRGSVSLRSADPKADPVLRFNYMSHAEDWEKFRHCV
RLTREIFGQSAFHDYRGPEIQPGEGVQSDEEIDAFLREHLESAYHPCGTCRMGAKDDPMA
VVDPQTRVIGIDGLRVADSSIFPHVTYGNLNGPSIMTGEKAADHILGKQPLARSNQEPWI
NPRAAVSDR

NT seq 1650 nt +upstreamnt +downstreamnt
atgcaagcagatttcgtcatcatcggctcgggctccgccggctccgccctcgcctaccgt
ctgtcggaaggcggcaagaacagcgtcatcgtcatcgaggcgggtggcagcgattttggg
ccgttcatccagatgccggcagcccttgcctggccgatgagcatgaagcgctataactgg
ggttatctgtccgagccggaggcgaacctcaacaaccggcgcatcaccgcgccgcgcggc
aaggtgatcggcggctcctcgtcgatcaacggcatggtctatgtgcgcggtcatgccgag
gatttcaatcgctgggaggagctcggcgccagcggctgggcctatgccgacgtgcttccc
tatttcaagcggatggaacattcgcatggcggcgaagaaggctggcgcggcaccgacggg
ccgctgcacgtccagcgcggcggtttcaccaatccgctcttccaagccttcgtcgaggcc
ggcaaacaggccggcttcgagacgacggaagattacaacggcagcaagcaggaaggcttc
gggctgatggagcagaccatcttcggcggccgccgctggtctgccgccaacgcctatctg
aaaccggcgctgaagcgggacaatgtcaagatcgtctacggcctggcgcagaggatcgtg
atcgaggacgggcgggcgaccggcgtcgagatcgaacgcaacggcaggatcgaggtggtg
aaggcgaaccgcgaggtgatcgtctcggcctcctcgttcaattcgccgaagctgctgatg
ctctcgggtatcggtcccggccaacatctgcaggacatgggcattgcggtgaaggccgac
cggccgggcgtcggcgccaacctgcaggaccatatggaattttatttccagcaggtcagc
accaagccggtgtcgctctattcctggctgccgtggttctggcagggggtggcgggcgcc
cagtggctgctctcgcgcggcgggctcggcgcctccaaccagttcgaagcctgcgccttc
ctgcgctcggcacccgggctgaagcagcccgatatccagtatcatttcctgccggtggcg
atcagctatgacggcaaggcggcggcgaaaagccacggcttccaggttcatgtcggctat
aatctgtcgaaatcgcgcggcagcgtgagcttacgctccgccgatcccaaggccgatccg
gtgctgcgcttcaactatatgagccatgccgaggattgggaaaaattccgccactgcgtg
cggctcacccgcgaaatcttcggccagagcgcctttcacgactatcgcgggccggagatc
cagccgggcgaaggcgtgcaaagcgacgaagagatcgacgccttcctgcgtgaacatctg
gaaagcgcctatcacccttgcggcacctgccggatgggcgccaaggacgatccgatggcg
gtggtcgatccacaaacacgggtgatcggcatcgatggcttgcgcgtcgccgacagctcg
atcttcccgcatgtcacctatggcaacttgaacggcccctcgatcatgaccggagagaaa
gcggccgaccatatcctcggcaaacagccgctggcacgctcgaaccaggagccgtggatc
aatccgcgcgcggccgtcagcgacagatag

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   GENEDB-RLE (1)   
   RHIZOBASE-RLE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (13)   
   Pfam (11)   
   PROSITE (2)   
All databases (26)

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