KEGG T00402: RL4720

Rhizobium leguminosarum bv. viciae 3841: RL4720

Entry

RL4720 CDS T00402

Gene name

gdhB

Definition

NAD-dependent glutamate dehydrogenase

Orthology

K15371

glutamate dehydrogenase [EC:1.4.1.2]

Organism

rle Rhizobium leguminosarum bv. viciae 3841

Pathway

rle00250	Alanine, aspartate and glutamate metabolism
rle00330	Arginine and proline metabolism
rle00430	Taurine and hypotaurine metabolism
rle00910	Nitrogen metabolism
rle01100	Metabolic pathways

Class

Metabolism; Energy metabolism; Nitrogen metabolism [PATH:rle00910]
Metabolism; Amino acid metabolism; Alanine, aspartate and glutamate metabolism [PATH:rle00250]
Metabolism; Amino acid metabolism; Arginine and proline metabolism [PATH:rle00330]
Metabolism; Metabolism of other amino acids; Taurine and hypotaurine metabolism [PATH:rle00430]

SSDB

Motif

Pfam:

Bac_GDH ELFV_dehydrog

Other DBs

NCBI-GI:

NCBI-GeneID:

GeneDB:

RhizoBase:

UniProt:

Position

5024336..5029114

AA seq 1592 aa
MAARNNPKREKQIESARKIAKATGEAHLDPEILFGRASNDDLELYTPEMLALSAVHSAKE
LAAWNGKAPRVGIDTITDVTPDGIAVSVLSVTDQNMPFLFESVMGEVTSTYRDLFMAVHP
ILVMEKGKAPALYSADHPSDPANRVSHIQLHIAPLNSTQAADLVKRIEKVLEQVRLSVSD
WKPMLSKIDGVIAELAANGASRKKADRDEAVAFLTWLRDENFTFLGMREYVYSGKGAEAK
VERDKGAGLGILSNPDVLVLRTGKDAVTTTPEILAFLDGPDFLIVTKANVKSIVHRRAYM
DYVGVKRFDADGNVTGELRIVGLFTSTAYTSLASEIPLLRSKIEKVKEHFGFDPMSHSGR
MLDNTLESYPRDDLFQIDTTLLASFAEQINDLGDRPRVRVLPRIDHFDRFVSVIVYVPRE
EYDSIVRERIGTYLKTVYDGRVSAYYPAFPEGGVARVHFIIGRSGGKTPRIPQAKLEQVI
REITARWDDRFEALAGVKAPKISVDQAFQDSFTPEETVADLADIGACATGEPLRIHFYHR
QEEEQGRILSLKIFHAGGQLALSRRVPLLENLGFNVVSERTFDIGVPVADGEKKLVVLHD
MELEARNGGEIDLQRYGAALEEGFVAAFAGTIDNDSFNRLILSAGLSARETNVLRAYARY
LRQAGIPYSQDYIATTLDKYPGVAAAIFRLFHDTLDTRLTEKARVKKLAELHQAIETELA
NVPSLDDDRILRRYVNIVDATLRTNYFQKNPDGSPKPMLAFKLDPHLVDGLPEPKPFREM
FVYGVEVEGVHLRFGKVARGGLRWSDRAEDYRTEVLGLVKAQQVKNAVIVPVGAKGGFYP
KKLPVSGSRDETFNAGREAYKTYIRTLLSITDNISGADIVPPKDTVRLDGDDPYFVVAAD
KGTATFSDTANALAQEAGFWLDDAFASGGSAGYDHKKMGITARGAWETVKRHFREMDIDI
QTTPFTVAGVGDMSGDVFGNGMLLSPKIRLIAAFDHRDIVIDPDPDMEKTLTERQRLFDL
PRSSWQDFDKSVLSKGAMIISRSAKSVTLTPEAVAAIGIDKAVATPFEIMTAILKSPVDL
LWFGGIGTYVKASSETDTEVGDRANDPIRITAAEVRAKVIGEGANLGVTQKGRIAYGLKG
GRCNSDAIDNSAGVNTSDVEVNIKIALAAAMHDGRLTRVKRDQLLSSMTSEVATLVLRNN
YLQSLAISLTERKGTANGLELGRFMSVLEGAGQLNRKVETLPDDQTLAERYAAGKPLTRP
EIGVLVSYAKIVLFDALAASDLPDDPYFIATLLNYFPVKMQKSNAGDIASHRLKREIVAT
VLANEAINRGGPSFTVAMMDATAASAPEVVRAAIVARDGFDLTRLWAETDALDGKISGDL
QNRIYEEISHSFIVLTRLLLKTGMTKADMVEVISRLQAALKKLKTAFAGQVAGEVAVRQA
EYSQAGLPEKLAADIASLPIFALVPEIMQIAERTGEPLVRAAENYIAVSQTFRIGRLLAA
GGRILTSDHYENLALARSIDQIASARRDIVISALSDHGKEKLPVQAWHAQDRIRINRILE
ELSSLSDGGDPNLARITVAAGILTDLARDRAR

NT seq 4779 nt +upstreamnt +downstreamnt
atggctgccagaaacaatccgaaacgggaaaagcagatcgaaagcgcgcgcaagatcgcc
aaggcgacgggcgaggcgcatctcgatccggaaattctcttcggccgggcaagcaatgac
gatctcgaactctatacgccggaaatgctggcgctctccgcggtgcattcggcaaaggaa
ctcgccgcctggaacggcaaggcgccccgcgtcggcatcgacacgattaccgatgtgacg
cctgatggcatcgccgtctcggtgctttcagtcaccgaccagaacatgccttttctgttt
gaatcggtcatgggcgaagtgacgagcacctatcgcgacctgttcatggccgtgcatccc
atcctggtcatggaaaagggcaaggcgccagcgctttattccgccgatcacccgagcgat
ccggccaaccgcgtcagccatatccagcttcatattgcgccgctcaattccacccaggcc
gccgatctcgtcaaacgcatcgaaaaagtgctcgaacaggtccgcctctcggtgtccgac
tggaagccgatgctttccaagatcgacggcgtgatcgcagagcttgcggccaatggcgcc
agccggaagaaggccgatcgcgacgaagccgtcgctttcctgacctggctgcgcgatgag
aatttcactttcctcggcatgcgggaatatgtctattccggcaaaggggccgaagccaaa
gtcgaacgcgacaagggtgctggcctcggcattctttccaatcccgatgttctcgtgctg
cgcaccggcaaggatgcggtgacgacgacacctgagatccttgccttcctcgacggcccc
gacttcctgatcgtcaccaaggcgaatgtgaaatcgatcgtccatcgccgggcctatatg
gattatgtcggcgtcaagcgcttcgacgccgacggcaacgtcaccggcgaactgcgcatc
gtcggtcttttcacctcgacggcctatacctcgctcgcctcggaaatcccgctgctgcgt
tccaagatcgagaaggtgaaggagcatttcggcttcgacccgatgagccattccggccgc
atgctcgacaatacgctggaatcctatccgcgcgacgaccttttccagatcgacacgacg
ctgcttgcaagttttgcggaacagatcaacgacttgggcgatcggccgcgcgtgcgcgtc
ctgccgcgcatcgaccatttcgaccgcttcgtctcggtgatcgtctacgtgccgcgcgag
gaatacgactcgatcgtccgagagcggatcggcacctatctgaagaccgtctatgacggc
cgagtctccgcctattacccggcttttccggaaggcggcgtggcgcgcgtgcatttcatc
atcggccgctccggcggcaagacgccacgcattccacaagcaaagctcgagcaggtgatc
cgcgagatcaccgcccgttgggacgaccgtttcgaggcactggcgggcgtcaaggcgccg
aagatatccgtcgaccaagccttccaggattccttcacgcccgaggaaaccgtggccgac
ctcgccgatatcggtgcctgcgccaccggcgaaccgctacgcatacacttttaccaccgt
caggaagaagaacagggccgcatcctttccttgaagatcttccacgccggcggccagttg
gcgctgtcgcgccgcgtgccgcttctcgagaatctcggcttcaacgtcgtcagtgaacgc
accttcgatatcggtgtgccggtcgccgatggagaaaagaaactcgtcgtgctgcacgat
atggagctcgaggcccgcaatggcggcgagatcgatctgcagcgttacggcgccgccctc
gaggaaggcttcgtcgccgctttcgccggcacgatcgacaatgacagcttcaaccggctg
atcctttcggccgggctctcggcgcgcgagacgaacgtgttgcgcgcctatgcgcgttat
ctccgccaggccggcatcccctattcgcaggattatattgcgacgacgctcgacaaatat
cccggtgttgccgccgccatcttccgtctcttccatgacacgctcgacaccaggcttacc
gagaaagctcgcgtcaagaagcttgccgaactgcaccaggcgatcgagactgaacttgcc
aacgtgccgagcctcgacgacgaccgtatcctgcgccgctatgtcaatatcgtcgatgcg
accctgcgcaccaattatttccagaagaacccggacggctcgccgaagccgatgctggcc
ttcaagcttgatccgcacttggtcgacggtctgccggagccgaagcccttccgcgagatg
ttcgtctacggcgtcgaagtcgagggcgtgcacctgcgcttcggcaaggtggcgcgcggc
ggcctgcgctggtcggaccgcgccgaggattaccgcaccgaagtgctcggcctcgtcaag
gcccagcaggtgaagaacgcggtcatcgtgccggtcggcgccaaaggcggcttttatccg
aagaagcttcctgtcagcggcagccgcgacgagaccttcaatgccggtcgcgaggcttac
aaaacctatatccgaacgctgctttcgatcaccgacaatatatcgggcgccgacatcgtc
ccgccgaaggacacggtcaggctcgatggcgacgatccctatttcgtcgtcgccgccgac
aagggcacggcgaccttttccgataccgccaatgcgctggcgcaggaagccggcttctgg
ctggacgacgccttcgcgtccggcggctcggccggctacgaccataagaagatgggcatc
accgcccgcggcgcctgggaaacagtaaaacgccatttccgtgagatggacatcgatatc
cagacgacgcccttcaccgtcgccggcgtcggcgatatgtcgggcgatgtcttcggcaac
ggcatgctgctttctcccaagatccggctcattgccgccttcgatcaccgcgacatcgtc
atcgatcccgatcccgatatggaaaagacgctgaccgaacgccagcgactcttcgacctg
ccgcgttcgagctggcaggacttcgacaaaagcgtgctgtcgaagggcgcgatgatcatt
tcccgctcggcgaaatcggtgacgctgacgccggaagcggttgccgcgatcggcatcgac
aaggccgtggcgacgcccttcgagatcatgacggcgatcctgaagagcccggtcgacctg
ctctggttcggcggcatcggcacctatgtgaaagcctcgtccgaaacagacaccgaagtc
ggcgaccgcgccaacgacccgatccgcatcacggcggcggaggtgcgcgccaaggtgatc
ggcgagggcgcaaacctcggcgtcacccagaagggccgcatcgcctacggtctgaagggt
gggcgctgcaactccgacgccatcgacaactcggccggcgtcaatacctcggacgtcgag
gtgaatatcaagatcgcgctggcagccgccatgcatgacgggcgcctgacgcgcgtaaaa
cgcgatcagcttctttcttcgatgaccagcgaagtggcgaccctggttctgcgcaacaac
tacctgcagtcgctggcaatctcactgacggaacgcaaggggacggcaaatggcctggag
cttggccgcttcatgagcgtgctcgagggcgccggccagctgaaccgcaaggtcgaaacg
ctgccggacgaccagaccctggccgaacgctatgcggccggcaagccgttgacgcggccg
gaaatcggcgtgctggtgtcttatgccaaaatcgtgctcttcgatgcgctggccgcaagc
gacctgcctgatgatccctatttcatcgcaacgcttttgaattacttccccgtgaagatg
cagaagtcgaacgccggcgatatcgccagccaccgcctgaagcgcgaaatcgttgcgacc
gtgcttgccaacgaagcgatcaatcgtggcgggccgagcttcaccgtcgccatgatggac
gcgacggcggcgtcggcaccggaagtggtgcgcgccgcaatcgtcgcgagagacggtttc
gacctgacccgcctgtgggccgagacggacgccctggacggcaagatatcaggcgatctg
cagaaccgcatctacgaggagatcagccacagctttatcgtgctgacgcgcctgctgctg
aaaacaggcatgaccaaggccgatatggtggaagtgattagccggcttcaggcggctctg
aagaagctgaaaaccgccttcgccggacaggtggccggcgaggtcgccgtgcgccaggcg
gagtacagccaggcgggcctgcccgaaaaactcgccgccgacatcgccagcctcccgatc
ttcgcactggtgccggagatcatgcagatcgccgagcgcaccggcgaacccctggtacgc
gccgccgagaactacatcgccgtgtcgcagaccttccgtatcggcaggctgctggcggcg
ggagggcggatccttacctcagaccattacgagaatctggcgcttgcccgcagcatcgac
cagattgccagcgcaaggcgcgacatcgtcatctcggccctttccgatcacggcaaggaa
aagctgcccgttcaagcctggcatgcacaggatcgtatccgcatcaaccgtatcctcgag
gagctttcaagcctcagcgatggtggcgatcccaatctcgcgcgtattaccgttgctgca
ggtatcctgaccgatcttgcgcgcgaccgggcgaggtga

All links

Pathway (5)   
   KEGG PATHWAY (5)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   GENEDB-RLE (1)   
   OC (1)   
   RHIZOBASE-RLE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (25)   

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