KEGG   Rhizobium johnstonii: pRL110107
Entry
pRL110107         CDS       T00402                                 
Name
(GenBank) conserved hypothetical exported protein
  KO
K10979  DNA end-binding protein Ku
Organism
rle  Rhizobium johnstonii
Pathway
rle03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:rle00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    pRL110107
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rle03400]
    pRL110107
DNA repair and recombination proteins [BR:rle03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     pRL110107
SSDB
Motif
Pfam: Ku DUF4906
Other DBs
NCBI-ProteinID: CAK03051
RhizoBase: pRL110107
UniProt: Q1M6T1
Position
pRL11:complement(124458..125270)
AA seq 270 aa
MAPKYYWKGYLKLSLVTCPVAMTPATSESEKVRFHTLNKETGNRVVSRYIDSVTGKPVKD
ENEAKGYARGENDYVILTEDDLDAVALDTVKTIDIDKFVPADSIEWIYLEKPHYLMPDDA
VGNEAFAVIRDAMKADKVFGVSKLVMGRRERAVVLEPRGEGIVLWTLRFGDEVRPEENYF
EEIDEQADPDLIPLVQQLIKKKSARWSPNMVSDPIQESLLKLIAEKKKALKPKKAAKGKA
AEVAPKSNVVSIMDALRKSVEADLKGRKSG
NT seq 813 nt   +upstreamnt  +downstreamnt
atggctccgaaatattactggaaaggctatctcaaactctccctggtcacctgccccgtg
gctatgaccccggccacgagcgaaagcgagaaggttcgcttccatacactcaacaaggag
acgggcaaccgcgtcgtctcccggtatatcgattccgtcacgggcaagcccgtcaaggac
gagaacgaagccaagggctacgctcgcggcgagaacgactacgttatcctcaccgaggac
gatctggatgccgttgcgctcgatacggtgaagacgatcgacatcgacaagttcgtcccg
gccgacagcatcgagtggatctaccttgagaagccacattacctgatgccggacgacgcc
gtcggcaacgaggcctttgcggtgatcagggatgccatgaaggccgacaaggttttcggc
gtttcgaagctcgtgatgggacgccgagagcgggcggtcgtcctggagccgcgcggcgaa
ggcatcgtgctctggacgctgcgtttcggcgacgaggttcgaccggaggagaattatttc
gaagagatcgacgagcaggcagatccggatctcattccccttgtgcagcagcttatcaag
aagaagagtgcgcggtggtcacccaacatggtcagcgacccaatccaggagagcctgctc
aagctcatcgctgagaagaagaaggcgctgaagccgaaaaaggcggcgaaggggaaggcg
gccgaagtcgctccgaagtcgaatgtggtcagcatcatggacgcgctccggaagagcgtc
gaggcagatctcaaaggtaggaagtcagggtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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