KEGG   Rhizobium johnstonii: pRL110312
Entry
pRL110312         CDS       T00402                                 
Name
(GenBank) putative uracil-DNA glycosylase
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
rle  Rhizobium johnstonii
Pathway
rle03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rle00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    pRL110312
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rle03400]
    pRL110312
Enzymes [BR:rle01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     pRL110312
DNA repair and recombination proteins [BR:rle03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     pRL110312
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: CAK03262
RhizoBase: pRL110312
UniProt: Q1M676
Position
pRL11:complement(346839..347480)
AA seq 213 aa
MKIAANVGPALAFEVADADSIAELRHQAEGCTRCDLFRNATQVVFGEGLVKSEIVLVGEQ
PGDQEDLTGRPFVGPAGRLLDRCLEEAGLDRQRCYVTNAVKHFKFTPRGKRRLHAKPNAG
EIRRCAWWLGAELNILQPKLVVALGASALYALLGPNAKLTPERGHILHPTNRPPVLVTIH
PSYLLRIRDEQEQHRQRREFVSDLHKAAAFRPA
NT seq 642 nt   +upstreamnt  +downstreamnt
atgaaaatcgccgcaaacgtcggtccggctctggcgttcgaagtcgcggatgccgacagc
attgccgaactccggcatcaggccgaaggctgcactcgttgtgatctcttcaggaatgcc
acgcaagtcgtcttcggcgaaggccttgtgaaatccgagatcgtccttgtcggcgagcag
ccgggcgatcaggaggatctgaccggcaggccttttgtcggtcccgctggccgcctgctc
gatcgctgcctcgaagaagccggtctcgatcgtcagcgctgttatgtcaccaatgccgtc
aagcacttcaagttcacgccgcgcggcaaacggcggctgcatgcaaaaccgaatgccggc
gagatcaggcgttgcgcctggtggctcggcgcagagcttaacatcctgcagccgaagctc
gtcgtggcgctcggcgcaagcgcgctttatgcgctgctcgggcctaacgccaagctgacg
ccggaacgcgggcacattctgcatccgacaaaccgtccgcctgtcctggtcacgatccac
ccctcctatctcttacgcatccgcgacgagcaagaacagcaccggcagcgccgggagttc
gtgtcagatctgcacaaggcggcggcgtttcggcccgcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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