KEGG   Rhizobium johnstonii: pRL120473
Entry
pRL120473         CDS       T00402                                 
Symbol
impC
Name
(GenBank) putative virulence-island/protein involved in nitrogen fixation
  KO
K11900  type VI secretion system protein ImpC
Organism
rle  Rhizobium johnstonii
Brite
KEGG Orthology (KO) [BR:rle00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rle02044]
    pRL120473 (impC)
Secretion system [BR:rle02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   pRL120473 (impC)
SSDB
Motif
Pfam: VipB VipB_2 Antimicrobial_7
Other DBs
NCBI-ProteinID: CAK12182
RhizoBase: pRL120473
UniProt: Q1M3Z1
Position
pRL12:complement(511731..513212)
AA seq 493 aa
MTAETQLQTKEDVGFAPDENLLSKVVAATRQTEPDRAQDLLRTLTDQALKGTVTYDRNLT
ITLNNAIAEIDKAISSQLAAIMQSPEFTKLEGAWRGLNYLVKNSETSANLKIRVLNASKR
DVAKDLAKAVEFDQSRLFKSVYEDEFGTPGGEPMGALIGDFEFDNSFDDVQLLQGVSMIA
AAAFAPFISAASPRMFGFEDFRELAKPRDLEKIFETVEYAKWRSLRDSDDSRFVTLAMPR
VLARMPYGPKTSPIEEFNFDETGGSKTGELSHGSYCWMNAAYVMGTRLTEAFAKNGWCTA
IRGAENGGKVEGLPMHIFSSDDGDLDLKCPTEVGITDRRDAELGKLGFLPLCHYKNTDYA
VFFGAQTAHKPKLYDRPEATANAAVSARLPYMMATSRFAHYLKVMGRDKIGSFMEAEDCE
AWLNRWISNYVNANDDAGEESRAKYPLREAKVTVQEIPGRPGAYNAVAWMRPWLQMEELT
TSLRMVARIPSKN
NT seq 1482 nt   +upstreamnt  +downstreamnt
atgaccgccgaaacgcaattgcaaacaaaggaagacgtaggcttcgcgcctgatgagaac
ctgctctcgaaggtcgttgcggcaacccgccagaccgagcccgaccgtgcccaggacctt
ctgcgcacccttaccgatcaagccctgaagggcaccgtcacctatgatcgcaacctgacg
atcaccttgaacaatgccattgccgaaatcgataaggcgatatcaagccagctcgcggcc
atcatgcaatcgcctgagttcaccaagctcgaaggcgcctggcgcggcctgaactatctc
gtcaagaacagcgagaccagcgccaacctgaagatccgcgtcctcaatgcatccaagcgc
gatgtcgccaaggatctggcaaaggccgtcgaattcgaccagtcgcggcttttcaagtcg
gtctatgaagacgaattcggcacgccgggcggcgaaccgatgggcgcgctgatcggcgat
ttcgaattcgacaattccttcgacgacgtccagctgctgcagggcgtctcgatgatcgcc
gcagccgctttcgccccgttcatctccgccgccagcccgcgcatgttcggcttcgaggat
ttccgggagctcgcaaaaccccgcgatctcgagaagatcttcgagacggttgaatacgcc
aagtggcgcagcctgcgtgacagcgatgattcccgcttcgtgacgctcgccatgccgcgt
gtgctcgcccgcatgccctatggcccgaagaccagcccgatcgaggagttcaacttcgac
gaaaccggcggctccaagaccggcgaactgtctcacggttcctactgctggatgaacgca
gcctatgtgatgggtacgcgtctcaccgaggccttcgccaagaacggctggtgcaccgcc
attcgcggggcggaaaacggcggcaaggtcgaagggctgccgatgcacatcttctcgagc
gacgacggcgatctggacctgaagtgcccgacggaagtcggtatcaccgatcgccgcgat
gccgaactcggcaagctcggcttcctgccgctttgccactacaagaacacggactatgcc
gtgttcttcggggcgcagaccgcgcacaagccgaagctctacgaccggcccgaggcgact
gcgaatgcggccgtttcagcccgcctgccctatatgatggcgacctcgcgcttcgcccat
tatctcaaggtcatgggccgcgataagatcggctccttcatggaagcggaagattgcgag
gcctggctcaatcgctggatctccaactatgtcaacgccaatgacgacgccggcgaagag
tcgcgagcgaaatatccgctgcgcgaggcaaaagtcaccgtacaggaaatccccggcagg
ccgggcgcctacaacgccgtggcctggatgcgcccgtggctgcagatggaggaattgacc
acctcgctgcgcatggtcgcccggattccctcgaagaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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