KEGG T00926: Rleg

Rhizobium leguminosarum bv. trifolii WSM1325: Rleg_7010

Entry

Rleg_7010 CDS T00926

Definition

DNA polymerase LigD, ligase domain protein

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

rlg Rhizobium leguminosarum bv. trifolii WSM1325

Pathway

rlg03410	Base excision repair
rlg03420	Nucleotide excision repair
rlg03430	Mismatch repair
rlg03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:rlg03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:rlg03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:rlg03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:rlg03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_C DNA_ligase_OB_2

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

pR132502:complement(437587..438639)

AA seq 350 aa
MTKPPKPKPLLEDADKPVRSRPRKPRNPAQPNLLLDPMPDRIDPCLALLKPKPPKGPQWA
FEVKWDGYRLAVHIEPTGIRILTRGGHDWTDRFPAIQQAALWLPVGTAILDGEAVVLDEQ
GRSDFGLLQQSLGGRGGKKRSSDAIFMAFDLLYFDGHDLRTSELDMRRHLLEDLVPACEL
GNIRLSEEIEADGDQLLASACEHGLEGIIAKRRNVPYRSGRLGDWLKIKCVQSDSFVIVG
YERSTVARAGIGRLLLAARKGNELVYVGGVGTGFNERSAAELREQMDKLIINKPAVDTGR
KRNAVFVRPELVAEIEYRAWTHDGKLRHASYKGLREAADQLAIYELDDIR

NT seq 1053 nt +upstreamnt +downstreamnt
atgacaaagccgccaaaaccaaagccgctcctggaggatgctgacaagccggttcgatcg
cggccgcgcaagccgcgaaatcctgcccagccgaacctcctcctcgaccccatgccggat
cgcatcgatccatgccttgctctcctgaagccgaagccgcccaaagggccgcaatgggcc
ttcgaagtgaaatgggatggctatcgcctggcagtgcatatcgagccgacgggcattcgc
atcctgacgcgcggcggccacgactggacggatcgcttcccggcaattcaacaagcggcc
ctgtggcttccggttggcacggcaatcctagatggcgaggccgtggttctcgacgagcag
ggccggtcggatttcggcttgctgcaacaatcgctgggcgggcggggcggcaagaagagg
tcaagcgacgccatcttcatggccttcgatctgctctatttcgacggtcacgacctcaga
acttccgaactcgacatgcgccggcatctgctcgaggatctagtgccggcctgcgagctg
ggcaatatccggctctcggaggagatcgaggccgacggtgatcagctgctggcaagcgcc
tgcgaacacggattggaaggtatcatcgccaagcgccggaacgtgccttatcgctccggc
cggctcggcgactggctgaaaatcaaatgcgtccagagcgacagttttgtgatcgtcggc
tatgagcgatccacagttgcgcgagctgggatcgggcggctgctgctcgccgcgcgcaag
ggaaacgagctcgtctacgttgggggcgttggaaccggcttcaacgaacgttccgccgcg
gagctccgggagcagatggacaagctgatcatcaacaagcccgctgtcgataccgggagg
aagcgaaatgccgtcttcgtccgtccggagctggttgccgagatcgaatatcgggcctgg
acgcatgacgggaagctacggcacgcgtcttataaggggttgcgcgaagccgctgatcaa
ctggcgatttatgagttggacgacatacgctaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-RLG (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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