KEGG T01572: RLO149

Roseobacter litoralis Och 149: RLO149_c015760

Entry

RLO149_c015760 CDS T01572

Gene name

rafA

Definition

alpha-galactosidase (EC:3.2.1.22)

Orthology

K07407

alpha-galactosidase [EC:3.2.1.22]

Organism

rli Roseobacter litoralis Och 149

Pathway

rli00052	Galactose metabolism
rli00561	Glycerolipid metabolism
rli00600	Sphingolipid metabolism

Class

Metabolism; Carbohydrate metabolism; Galactose metabolism [PATH:rli00052]
Metabolism; Lipid metabolism; Glycerolipid metabolism [PATH:rli00561]
Metabolism; Lipid metabolism; Sphingolipid metabolism [PATH:rli00600]

SSDB

Motif

Pfam:

Melibiase DUF187

Other DBs

NCBI-GI:

339503114

NCBI-GeneID:

10949959

UniProt:

F7ZG31

Position

complement(1626712..1628796)

AA seq 694 aa
MTECWRLDDARQTLALASTNGRCPQVIYWGAPLPPGEDLCALSDVSTLDVTGGMLDQNPD
LSLCPEAARSFPGQPGLIVRDRDGTPFLPKFRLDHVTQSELTLTVTCVDAANQLTYVAEF
TLDADTHVIAMTARLSADRPLHLHWLAAPVLPAPQHSEEMIDFAGRWCGEFQMNRTAWSP
GIRYRENRTGRTGHEHFPGLVVPCKGATNTAGEAYAFHYGWSGGHRMIAEELPDGRRQIQ
FGHAARMETAAATEFRTAPLYAVYSCDGLNGCAVSFQRHVRDRIVSWTETGRPRPVHYNC
WEAVYFKHDLPVLKDIATRAAALGAERFVLDDGWFGQRDDDTSSLSDWEVDPRKYPDGLG
PLIDFIHAQDMSFGIWFEPEMINPNSNIHRAHPHWALGAEDQILGRQQKALNMALPEVRD
FLYQRISALLSAHPIDYIKWDHNRVLPMPDAAQTRGSYALMDRLRADFPHVEIESCASGG
GRIDFGILHRTQRVWLSDSNDALERLKMQHNAALFLPSCVTGSHVGPRKCHTSGRILDIE
FRAWVAAQRHMGFEMDPRELTDEEADVLRDVSQWWKNNRDWMDTGDILRLDAADPSVIAE
QQLARNGGQFVVFVGKSGTSDQIAPRPLRLTRLEPEARYEVSLRNRKAASHLSRGSLALK
DGPVTLSGAALMQNGLTLPWSFPESMWVLEGRRL

NT seq 2085 nt +upstreamnt +downstreamnt
gtgacagagtgctggcggctggatgacgcgcgccagacgctggcgcttgcctcgacaaat
gggcggtgcccgcaggtcatttactggggcgcgcccctgccaccgggcgaagacctgtgc
gcgctcagcgatgtcagcacgctcgatgtgacgggtggcatgctggatcagaacccggat
ctgtcgctctgccctgaggctgcacgcagcttcccgggccagcccggtctcattgtgcgt
gaccgggacggcacgcctttcctgccgaaattccggctggatcacgtgacgcagtccgag
ctgaccttgaccgtgacctgcgtcgacgcggccaaccaactgacctatgtggcggaattt
acgctcgatgccgacacccatgtgatcgccatgacagcacggctatctgctgaccgaccg
ctgcatctgcactggctggccgcccctgtcctgcccgccccgcaacatagcgaggagatg
attgatttcgcaggccgctggtgtggtgaattccagatgaaccgcaccgcatggtcgccg
ggcatccgctaccgcgaaaaccgcacggggcgcaccggccacgagcattttcccggtctg
gtcgttccctgcaagggggcgaccaataccgcaggtgaggcttatgcctttcactacggc
tggtccggcgggcaccggatgatcgccgaagaattgcccgatggccggcgccagatccag
ttcggccacgccgcccgcatggaaacggctgccgccactgaattccgtaccgccccgctt
tatgcggtctattcctgcgacggtctcaacggctgcgcggtctcctttcaacgccatgtg
cgcgaccggatcgtcagctggaccgagacgggccgcccgcgcccggtgcattataactgc
tgggaagcggtctatttcaaacacgacctgccggtgctcaaggacatcgccacacgggcc
gccgcccttggtgcggagcgtttcgtgctggatgatggctggttcgggcagcgcgacgat
gacacctcgtcgctgtcggactgggaagtggacccgcgcaaatacccggacgggttgggg
ccgctgatcgattttatacatgcacaagacatgagttttggcatctggttcgagccggaa
atgatcaatccgaattccaacatccaccgcgcccatccccattgggcgttgggggcagag
gatcaaatccttggccgtcagcaaaaggcgctcaacatggccttgccggaggtgcgcgat
ttcctctatcagcgcatatctgcgctgctctctgctcaccccatcgactacatcaaatgg
gaccacaaccgggtcttgcccatgcccgatgcggcccagacccgcggctcctatgcgctg
atggatcggctgcgcgccgattttccgcatgtggaaattgaaagctgcgcttcgggtggc
gggcggattgatttcggcatcctgcaccgcacgcaaagggtctggttgtccgatagcaat
gatgcgctggaacggctgaagatgcagcacaacgccgcgctttttttaccttcctgcgtc
accggcagccatgtggggccgcgcaaatgccatacctcgggccgtatattagacattgaa
ttccgcgcttgggtggcggcacaacgccatatggggtttgagatggacccgcgcgagttg
accgacgaggaagcagacgttctgcgtgatgtttcccagtggtggaagaacaaccgcgac
tggatggacacaggcgatatcctgcggctggatgcggcggacccgtcggtcattgccgaa
cagcaacttgcccggaacggcggccaattcgtggtctttgtcggtaaatccggcacgtcg
gatcagatcgccccgcgccctttgcgcctgacccggctggagccagaggcgcgttacgag
gtcagcctgcgcaatcgcaaggccgcatcgcatctgtcgcggggctctttggccctcaag
gacggccctgtcacgctgagcggggcagccctgatgcaaaacggcctcacgctgccatgg
agttttcccgaatccatgtgggtgctggagggccgccgcctgtga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (20)   
   KEGG COMPOUND (20)   
Chemical reaction (13)   
   KEGG ENZYME (1)   
   KEGG REACTION (12)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (45)   

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