KEGG T01572: RLO149

Roseobacter litoralis Och 149: RLO149_c026640

Entry

RLO149_c026640 CDS T01572

Definition

DNA polymerase III subunit delta

Orthology

K02341

DNA polymerase III subunit delta' [EC:2.7.7.7]

Organism

rli Roseobacter litoralis Och 149

Pathway

rli00230	Purine metabolism
rli00240	Pyrimidine metabolism
rli01100	Metabolic pathways
rli03030	DNA replication
rli03430	Mismatch repair
rli03440	Homologous recombination

Module

rli_M00260

DNA polymerase III complex, bacteria

Class

Metabolism; Nucleotide metabolism; Purine metabolism [PATH:rli00230]
Metabolism; Nucleotide metabolism; Pyrimidine metabolism [PATH:rli00240]
Genetic Information Processing; Replication and repair; DNA replication [PATH:rli03030]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:rli03430]
Genetic Information Processing; Replication and repair; Homologous recombination [PATH:rli03440]

SSDB

Motif

Pfam:

DNA_pol3_delta2 AAA AAA_16 IstB_IS21 AAA_22 AAA_25 NACHT Mg_chelatase AAA_5 AAA_33 AAA_14 AAA_29 DNA_pol3_delta

Other DBs

NCBI-GI:

339504169

NCBI-GeneID:

10951043

UniProt:

F7ZEB3

Position

2726934..2728040

AA seq 368 aa
MTAPDQIEGAPHPRDTLQVFGQATAEQTFLDAFATGRLHHAWLLTGPRGVGKATLAWSIA
RFLLATPLQEDDGLLGVPPAPTSLAIDPEHPVARRIVAGAEPGLKSIIRSENEKTGRMRD
VISVDDIRSLSSFFQLSATDGGRRVVIVDAADDMNPQAANALLKMLEEPPARATLILTSH
QPSSLLPTIRSRCRVLRLGTLPPDDMQKAFTQAGIDPGGNAPALAELSGGSVGAAVRLSN
LDGLKTYAELVQLINALPQFDRVRALKLAEAAAARGAETKRDLLFVLLDLLMSRLARAGA
TGLPPSIEATPGEAATLMRLSPDPAAARAWAEIAQETGARARHGLAVNLDPAALVLDTLI
KISQTRVT

NT seq 1107 nt +upstreamnt +downstreamnt
atgacagccccggatcaaatcgaaggggcaccgcacccgcgcgacacgctgcaggttttt
ggtcaggcgactgcagagcagacctttctggatgcctttgccacggggcggcttcatcac
gcgtggttgctgactgggccacgcggggtcggcaaggcgacgctggcatggtccattgcg
cggttcctgctggccacgccgctgcaagaagacgatggccttttgggtgtaccaccggcc
cccacatccctcgcgattgaccccgagcatcctgtcgcaagacggattgtagcgggcgca
gaaccgggtctgaaatccatcataaggtcagaaaatgaaaaaaccgggcggatgcgtgat
gtcatttctgtcgatgacatccgcagcctgtcttcgttctttcaactttccgccacagat
ggcgggcggcgggtggtcatcgtggatgctgcggatgacatgaacccacaggccgcaaac
gcccttttgaagatgcttgaggaacccccggcgcgcgccacgttgatcctgaccagccat
caaccgtccagtcttttgcccacgatccgctctcggtgccgcgtgttacgcttgggcact
ctgccgcccgacgacatgcaaaaagcctttacgcaggcggggattgatcctggcgggaac
gcacctgcattggccgaactgtcgggcgggtcggttggggcggctgtacgactgtcaaac
ctcgatggcctcaagacatatgccgagcttgttcaactcatcaacgcgctgccgcagttc
gaccgggtgcgcgcattgaaactggccgaagcggccgcagcgcgcggggctgagacgaaa
cgtgatctgctgttcgtgctgctcgatttgcttatgtcgcgtctggcgcgcgccggggca
actggcctacccccttctatcgaggccacgcccggcgaggcggcaaccttgatgcggctc
tcgccagaccctgccgcagcgcgcgcctgggccgagatcgcgcaggagaccggcgcacgt
gcgcgccatggacttgcagtgaaccttgaccctgcggctctcgtcctagataccctcatc
aagatcagccaaacacgtgtgacctag

All links

Pathway (7)   
   KEGG PATHWAY (6)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (38)   

Download RDF

DBGET integrated database retrieval system