KEGG T00779: Rleg2

Rhizobium leguminosarum bv. trifolii WSM2304: Rleg2_5212

Entry

Rleg2_5212 CDS T00779

Gene name

ligC

Definition

ATP-dependent DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

rlt Rhizobium leguminosarum bv. trifolii WSM2304

Pathway

rlt03410	Base excision repair
rlt03420	Nucleotide excision repair
rlt03430	Mismatch repair
rlt03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:rlt03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:rlt03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:rlt03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:rlt03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_C

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

pRLG201:845719..846738

AA seq 339 aa
MAKRASSDRAFGLPLDIQPMEARSADDLPDDRGWQYEPKWDGFRCLVFKEGSAVDLRAKS
GKPLGRYFPEISEFFANLSLERFVVDGELVIDIDGKLSFDALQMRLHPAESRVQRLSAET
PAKLVLFDMLMGIDGIPILDQDLEFRRAALEAFAKDAINQGRLILSPFTRDRIEATRWLS
ASGADTDGVVCKRVDGLYLPGERAMMKVKRLRTADCVVGGFRYESDSHFVGSLLLGLYND
QGDLDHVGFTSTITDAERPELTSRLEALRGGSGFTGKAPGGPSRWSTRRSSEWEPLTPEL
VVEVRFDHVTGHRFRHGTKLLRWRPDKRPRQCKFEQIER

NT seq 1020 nt +upstreamnt +downstreamnt
atggctaagcgtgcatcaagcgatcgggcgttcgggctaccgctcgatatccagcccatg
gaagcccgctcagcggacgacttaccagatgaccggggctggcagtatgagcccaaatgg
gatgggtttcgctgtctggtgttcaaggaaggcagcgccgtggacctgcgggcgaaatcg
gggaaaccacttggacgctattttcccgagatctcagaattctttgcaaatctgtcgctc
gagcgcttcgtggtcgacggggagcttgtgatcgacatcgacgggaagctttcattcgac
gcattgcagatgcgcctgcacccggccgaaagccgcgtccagaggctgtccgccgaaacc
cctgcgaagctggttctgttcgatatgctgatgggcatcgacggtattccgatccttgat
caggacttggagtttcgccgcgctgccttggaggcgttcgcaaaggatgccattaaccaa
gggcgtttgatcttgtcgcccttcacgcgcgatcggattgaagcaacacggtggctgtcg
gcatctggtgctgataccgatggtgtcgtgtgcaagcgcgttgacgggctctacctacca
ggcgaacgggcaatgatgaaggtgaagcggttgaggacggccgactgtgtcgtcggcggt
tttcggtatgagagtgacagccacttcgtcggctctcttctcctcggtctttacaacgat
cagggcgacctcgaccatgttggcttcacgtccacgatcacagacgccgagcggccggaa
ctgacgtcgaggcttgaagcgctgcgaggcgggtcgggctttacgggcaaagcaccaggt
gggccaagtcgatggagcacaaggcggtcgtcggagtgggagcccctgacgccagaactt
gttgtcgaagtgcgtttcgaccatgtgaccggccaccgcttccggcacggcaccaagctt
cttcggtggcgccccgacaagcggccgaggcagtgcaagtttgagcagatcgagcgataa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-RLT (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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