KEGG T00779: Rleg2

Rhizobium leguminosarum bv. trifolii WSM2304: Rleg2_5730

Entry

Rleg2_5730 CDS T00779

Definition

DNA polymerase LigD, ligase domain protein

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

rlt Rhizobium leguminosarum bv. trifolii WSM2304

Pathway

rlt03410	Base excision repair
rlt03420	Nucleotide excision repair
rlt03430	Mismatch repair
rlt03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:rlt03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:rlt03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:rlt03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:rlt03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_C mRNA_cap_enzyme DNA_ligase_OB_2

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

pRLG202:complement(129691..130743)

AA seq 350 aa
MTRSRRPSLPFLNESNATLQSRPIRKRDPDQPSLPFDPMPARVEPCLALLKPKVPIGPDW
LYEAKWDGYRLAIHIEPKGVRVITRGGHDWTHRFPTIAAAAKELGVTTGILDGEAVVLDD
HGRSDFGALQRSLGGRGGKRASSESILYAFDLLYLDGHDLTGTELAVRRHLLKDLIPEDN
RTIRFSEEIDLPAEDLLEHACHHHMEGIIAKHRDRPYSSGRTGDWLKIKCVESESFMIVG
YEQSAAARGGIGSLLLAGKRGFDWISVGSVGTGFSASDAAQLKKTLDRLKTNRPVVPLKG
KRYVFVQPTLIAEIEFRGWTDDGSLRHASYKGLREVQDNAAVFDMTGFDR

NT seq 1053 nt +upstreamnt +downstreamnt
atgacgcgctcgcgccgcccctcattgccattcctcaacgagtccaatgcaacgctgcag
tctcgtccgatccgcaagcgcgatcctgaccagccaagccttccgttcgatccaatgccg
gcgagggtcgagccgtgcctcgcactgctgaagcccaaggtgccgatagggccggattgg
ctctacgaggcgaagtgggatggctaccggcttgcgatccacatcgagccgaagggcgtt
cgtgtcatcacccgcggcggccatgactggacgcatcgttttcccaccatcgccgcggcc
gccaaagaactcggtgtgaccaccggcatactggacggggaagcggtggttttggacgac
cacggccgatcggatttcggcgcgctgcaacgttcgctcggcggtcgaggcggcaagcgg
gcctcaagcgagtccattctctacgccttcgaccttttgtatcttgacgggcatgacctc
accggcaccgagcttgccgtacgccggcaccttcttaaagacctgataccggaagacaat
cggacgatccgcttttccgaagaaatagacctaccggccgaagatctcctcgagcacgcc
tgccaccatcatatggaaggcatcatcgccaaacatcgcgaccggccctacagcagtggc
cgcacgggcgactggctgaaaatcaagtgcgttgagagcgagagcttcatgattgtcggt
tacgaacaatcggcagccgcccgcggcggcatcggcagcctgctgctcgccggcaagagg
ggtttcgattggatttccgtgggctcggtcggaaccggtttcagcgccagcgacgccgcg
cagctgaaaaagacgctcgaccggttgaagaccaaccggccggtcgttcccctgaagggc
aagcgctacgtcttcgtccagccgaccctcatcgccgagatcgaatttcgcggctggacc
gatgacggcagcctgcgtcacgcctcctataaggggctgcgcgaggttcaggacaatgcg
gccgtgttcgatatgaccggctttgaccgttga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-RLT (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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