KEGG   Rhizobium leguminosarum bv. trifolii WSM2304: Rleg2_5730
Entry
Rleg2_5730        CDS       T00779                                 
Name
(GenBank) DNA polymerase LigD, ligase domain protein
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
rlt  Rhizobium leguminosarum bv. trifolii WSM2304
Pathway
rlt03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:rlt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    Rleg2_5730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rlt03400]
    Rleg2_5730
Enzymes [BR:rlt01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Rleg2_5730
DNA repair and recombination proteins [BR:rlt03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Rleg2_5730
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C RNA_ligase mRNA_cap_enzyme GPAT_C HetR_C
Other DBs
NCBI-ProteinID: ACI58905
UniProt: B6A3C2
Position
pRLG202:complement(129691..130743)
AA seq 350 aa
MTRSRRPSLPFLNESNATLQSRPIRKRDPDQPSLPFDPMPARVEPCLALLKPKVPIGPDW
LYEAKWDGYRLAIHIEPKGVRVITRGGHDWTHRFPTIAAAAKELGVTTGILDGEAVVLDD
HGRSDFGALQRSLGGRGGKRASSESILYAFDLLYLDGHDLTGTELAVRRHLLKDLIPEDN
RTIRFSEEIDLPAEDLLEHACHHHMEGIIAKHRDRPYSSGRTGDWLKIKCVESESFMIVG
YEQSAAARGGIGSLLLAGKRGFDWISVGSVGTGFSASDAAQLKKTLDRLKTNRPVVPLKG
KRYVFVQPTLIAEIEFRGWTDDGSLRHASYKGLREVQDNAAVFDMTGFDR
NT seq 1053 nt   +upstreamnt  +downstreamnt
atgacgcgctcgcgccgcccctcattgccattcctcaacgagtccaatgcaacgctgcag
tctcgtccgatccgcaagcgcgatcctgaccagccaagccttccgttcgatccaatgccg
gcgagggtcgagccgtgcctcgcactgctgaagcccaaggtgccgatagggccggattgg
ctctacgaggcgaagtgggatggctaccggcttgcgatccacatcgagccgaagggcgtt
cgtgtcatcacccgcggcggccatgactggacgcatcgttttcccaccatcgccgcggcc
gccaaagaactcggtgtgaccaccggcatactggacggggaagcggtggttttggacgac
cacggccgatcggatttcggcgcgctgcaacgttcgctcggcggtcgaggcggcaagcgg
gcctcaagcgagtccattctctacgccttcgaccttttgtatcttgacgggcatgacctc
accggcaccgagcttgccgtacgccggcaccttcttaaagacctgataccggaagacaat
cggacgatccgcttttccgaagaaatagacctaccggccgaagatctcctcgagcacgcc
tgccaccatcatatggaaggcatcatcgccaaacatcgcgaccggccctacagcagtggc
cgcacgggcgactggctgaaaatcaagtgcgttgagagcgagagcttcatgattgtcggt
tacgaacaatcggcagccgcccgcggcggcatcggcagcctgctgctcgccggcaagagg
ggtttcgattggatttccgtgggctcggtcggaaccggtttcagcgccagcgacgccgcg
cagctgaaaaagacgctcgaccggttgaagaccaaccggccggtcgttcccctgaagggc
aagcgctacgtcttcgtccagccgaccctcatcgccgagatcgaatttcgcggctggacc
gatgacggcagcctgcgtcacgcctcctataaggggctgcgcgaggttcaggacaatgcg
gccgtgttcgatatgaccggctttgaccgttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (22)   

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