KEGG   Rhizobium leguminosarum bv. trifolii CB782: RLEG12_29725
Entry
RLEG12_29725      CDS       T03015                                 
Name
(GenBank) primosome assembly protein PriA
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
rlu  Rhizobium leguminosarum bv. trifolii CB782
Pathway
rlu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rlu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    RLEG12_29725
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rlu03400]
    RLEG12_29725
Enzymes [BR:rlu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     RLEG12_29725
DNA repair and recombination proteins [BR:rlu03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     RLEG12_29725
SSDB
Motif
Pfam: PriA_3primeBD PriA_C DEAD ResIII PriA_CRR Helicase_C zinc-ribbons_6 AAA_30 AAA_22 DUF6276 ADDB_N Mu-like_Com
Other DBs
NCBI-ProteinID: AHG47178
Position
complement(3659270..3661486)
AA seq 738 aa
MSIDSSDLFGALFEAPPANRTVPVLVPMPAPKPYSYSVPDGMAVEPGSVVQVPLGPRQVI
GVVWDGGEDGVDPKKLRPISHVFDCPPLSREMRDFIDWVAAYTLSPPGLVARMALRAPNA
FEPEPMVEGLKFVGGEPERMTPARARVLETASDGLSWTRSGLAHAAGVSTSVVDGLITLG
IFETIFLPPPPVVALPDPEFAAARLEGPQKEAAAEIVSDIRKGEFSVSLIDGVTGSGKTE
VYFEAIAETLKRGKQVLILLPEIALTASFMERFQDRFGAKPAEWHSDLAPRMREKVWRQA
VTGEVRVVAGARSALFLPFEDLGLIIVDEEHDPAYKQEDRVFYNARDMAVVRGRIGDFPV
ILVSATPSVESQVNGQSGRYSTVHLPTRFGDAALPDLHLVDMRRHAPERGGFLSPVLIRA
IGKTVERREQALLFLNRRGYAPLTLCRVCGHRFQCPQCSSWLVEHRFRKQLQCHQCGHAE
RTPEACPECGTLDHLVACGPGVERIAEEVERYFPEARTIVLSSDIMGGVKRLRLELEAIA
KGEADIVIGTQLVAKGHNFPLMTLVGIVDADLGLANGDPRAAERTFQLLSQVTGRAGRTG
LKSHGLLQTYQPQHPVMQAIVSGDSDAFYEREIGERERAILPPFGRLASIIVSAETRHDA
ENHARGMRNAAPQISGISVLGPAEAPLALVRGRHRFRLLVHGRRNSDMQGFLRAMLSQSP
KERGSVQVQLDIDPQSFL
NT seq 2217 nt   +upstreamnt  +downstreamnt
atgagcatagattcgtccgatctctttggcgcgcttttcgaggcaccgcccgcgaaccga
acggttcccgtgctggtgccgatgccggcgcccaaaccctattcctattcggtgccggat
ggcatggcggtcgagcccggctcggtcgtacaggtgccgctcgggccgcggcaggtgatc
ggcgtcgtctgggacggcggcgaggatggtgtcgatccgaagaagcttcggccgatcagc
catgtcttcgactgcccgccgctttcccgggagatgcgcgatttcatcgattgggttgcg
gcctatacgctctcgccgcccggcctcgtcgcccgtatggcgctcagggcaccgaacgcc
ttcgaaccggaaccgatggtcgaggggctgaaatttgtcggcggcgaaccggagcggatg
acgccggcgcgcgcccgggtacttgaaacggcctccgacggcctgtcctggacacgtagc
ggcctggcacatgcggcgggtgtttcgaccagcgtcgtcgacgggctgatcacgctcggc
atcttcgaaaccatatttctgccgccgccgccggtcgtggcattgcccgatccggaattt
gccgccgcccgtctcgaagggccgcaaaaggaggcggcggcggagatcgtttccgacatc
cgcaagggcgaattttcggtgtcgctgatcgacggggtgaccggatccggcaagaccgaa
gtctatttcgaggcgatcgccgagacgctgaaacgcggcaagcaggtgctgatcctgctg
ccggagatcgcgctgacagcaagtttcatggagcgcttccaggatcgcttcggggcaaag
ccggccgaatggcattccgatctcgcgccgcgcatgcgtgaaaaggtctggcgccaggcg
gtgaccggcgaggtgcgcgtcgtggccggcgcccgctcggcgctgttcctgcctttcgag
gatctcggcctgatcatcgtcgacgaggagcatgatcccgcctacaagcaggaggatcgc
gtcttctacaatgcccgcgacatggccgtggtgcgcggtcgcatcggtgattttcccgtc
attctggtgtcggcgaccccctcggtcgaaagccaggtcaacggtcagagcgggcgctac
agcaccgtccatctgccgacgcgtttcggcgacgcggcgctgccggacctgcatcttgtc
gacatgcgccggcacgcaccggagcgcggcggtttcctgtcgccggtgctgatccgggca
atcggcaagacggtggaaaggcgcgaacaggcgctgctctttctcaaccggcgcggttat
gcgccgctgacgctctgccgggtctgcggtcaccggttccaatgcccgcaatgttcgagc
tggctggtcgagcaccgcttccgcaaacagctgcaatgccatcaatgcggccatgccgag
cgcacgccggaggcatgcccggaatgcggcacactcgaccatctcgttgcctgcggacca
ggcgtcgagcgcatcgccgaggaggtggagcggtattttccggaggcgcggacgatcgtt
ctctcctccgatatcatgggcggggtgaagcggctgcggttggagctggaggcgattgcc
aagggtgaggccgatatcgtcatcggcacgcagctcgtcgctaagggacataactttccg
ctgatgacgctggtcggcatcgtcgacgccgacctcggcctggccaatggcgatccgcgc
gctgccgaacgcaccttccagcttttgtcgcaggtgacgggccgcgccgggcgcactggt
ctcaaaagccatgggctgctgcagacttaccagccccagcatcccgtcatgcaagcgatt
gtgtcgggcgattccgacgccttttatgagcgcgagattggcgaacgcgaacgcgccata
ttgccgcccttcggcaggctcgcctcgatcatcgtttcggctgaaacccgccacgatgcc
gaaaaccatgcgcgcggcatgcgcaatgcggcgccgcagatttccggcatttcggtgctc
ggcccggccgaagccccgttggcgctggtgcgcggccgccatcgcttccgcctcctggtg
cacggtcggcgcaactcggacatgcaggggttcctgcgggcgatgctgtcgcaatcgccc
aaggagcgcggctcggtgcaggttcagctcgatatcgatccgcagagttttctctaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (12)   
   Pfam (12)   
All databases (21)   

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