KEGG   Candidatus Ruthia magnifica (Calyptogena magnifica): Rmag_0134
Entry
Rmag_0134         CDS       T00438                                 
Name
(GenBank) DNA polymerase III, delta subunit
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
rma  Candidatus Ruthia magnifica (Calyptogena magnifica)
Pathway
rma03030  DNA replication
rma03430  Mismatch repair
rma03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rma00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Rmag_0134
   03430 Mismatch repair
    Rmag_0134
   03440 Homologous recombination
    Rmag_0134
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rma03032]
    Rmag_0134
   03400 DNA repair and recombination proteins [BR:rma03400]
    Rmag_0134
Enzymes [BR:rma01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Rmag_0134
DNA replication proteins [BR:rma03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Rmag_0134
DNA repair and recombination proteins [BR:rma03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Rmag_0134
SSDB
Motif
Pfam: DNA_pol3_delta DNA_pol3_delt_C DNA_pol3_delta_C
Other DBs
NCBI-ProteinID: ABL01928
UniProt: A1AVH1
Position
complement(157219..158238)
AA seq 339 aa
MKIKPQQLNIQLVNKLDTIYFIFGAEILLIEQSLAQINKTAKKVGFDERISFDIDANFDW
NQIFREISAVSLFSPKCIIKCRLKTGKIGIKGAKALTEIASTLPDDILLIVSTGKLDMAQ
QKSKWFKTLEQLGTVVQHFEMQSNHLVDWIANHMAELGLEANTEIAQSIAFCTEGNLTAS
MQEIQKLKMAYPNGKINTQEYLEQANQQSKYTVYGLIDAALFGNSNQVNKIYQTLISDTI
MPIQLSNSLYLEIKSIIEMSVELIQVKNINIVLQNNRVWNKRKPIITNILKRHSYQRLQK
LLLSLGRIDRSIKGMDNLNVIDELHTLLLSLAGKTQWTQ
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgaaaattaaaccgcagcaacttaatattcaattagtcaacaaacttgatactatttat
tttatttttggtgcggaaatattactcattgaacaaagtttagcgcaaataaataaaaca
gcaaaaaaagttgggtttgacgaacggataagttttgatattgatgctaattttgattgg
aatcaaatctttagagaaatctcagccgtttctcttttttcaccgaaatgtattattaaa
tgtcgactaaagacagggaaaatcggcattaaaggtgctaaagcattgactgaaattgcc
agcactctgcctgatgatattttattgattgtttccactggaaaactggacatggcacag
caaaagagcaaatggttcaaaacactagaacagcttggtactgttgttcagcacttcgaa
atgcaaagcaatcatttggttgattggattgcaaatcatatggccgaattaggacttgag
gccaatacagaaattgcacaaagtattgctttttgcacagaaggcaatttgactgcttct
atgcaagaaattcaaaaactaaaaatggcttatccaaatggtaaaattaacacacaagaa
tatcttgaacaagctaatcagcaatctaaatacactgtttatggcttaattgatgcagct
ttatttggcaatagtaatcaagttaataaaatttatcaaaccttaatctctgatacgatt
atgccaattcaactaagtaattccttatacctagaaattaaatcaataatcgagatgtca
gttgaacttatacaagtgaaaaatattaatatagtcttgcaaaataatcgagtttggaat
aaaagaaaacctattattaccaatatattaaaacgccattcttatcagcgtttgcaaaaa
ttattattatcactaggacgtattgatcgctcaatcaagggtatggataatcttaatgtc
attgatgaattacacacattattactaagcttggctggaaagacacaatggactcaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (37)   

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