KEGG T00438: Rmag

Candidatus Ruthia magnifica: Rmag_0155

Entry

Rmag_0155 CDS T00438

Definition

UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)

Orthology

K01928

UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]

Organism

rma Candidatus Ruthia magnifica

Pathway

rma00300	Lysine biosynthesis
rma00550	Peptidoglycan biosynthesis

Class

Metabolism; Amino acid metabolism; Lysine biosynthesis [PATH:rma00300]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:rma00550]

SSDB

Motif

Pfam:

Mur_ligase_M Mur_ligase_C Mur_ligase Sec6

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(180638..182032)

AA seq 464 aa
MNISQLLANIVQTKIDIEIKGLCLNAQSTQPGDLFIALQGKLTHGADYINQAIDKGCVAI
LVDSKEIECVIPSIRIDNLSQYLQTLANTFYKNAIKVNIISITGTNGKTSVAYFISQLLT
KLGIKNGLIGTLGITHSQQLSLNTTPDILTLYQVLDNYYQNNIHHAILEVSSHALTQDRI
AGLNIKQAIFTNLTQDHLDYHHTLDKYQATKEKLFVLDTVESVILNQDDSHYKHFLNITK
DKKRISYSLGDFDSIKTIEQGFLVQLDHYVFEIPFLGEFNLLNILAALNSVEALGFKRDD
IIPLFYQLLPPPGRMQRIEPHLAWIDYAHTPDAIGNAITTLKKHYPNFKIRIVFGCGGNR
DKDKRAEMGKIASNLADTIILTNDNPRSENPKTIIENILSGIDDSYKLDIIENRQLAIET
AITTLKENECLLIAGKGHETIQQFSDKTIYLNDLEIAQNSTKAI

NT seq 1395 nt +upstreamnt +downstreamnt
atgaatatttctcagcttttagccaatattgtacaaactaagatagacatagagataaag
ggcttgtgtcttaatgctcaaagcacacaacctggagatttgtttattgcacttcaaggg
aaattaacacacggtgctgattatatcaaccaagcaatcgacaaaggctgcgttgctata
ttagttgactcaaaagagatagaatgtgtcattccatctattcgtattgacaacttatct
caatatttacaaacactggcaaatactttttataaaaatgctataaaagttaatatcatt
agtatcacaggtacgaatggtaaaacttctgttgcctactttatctcgcaattactaacc
aaacttgggattaaaaatggtttaattggcactttaggtatcactcatagtcaacagtta
tcccttaatacaacgccagatattttgacgctttaccaagtattagataattactatcaa
aacaatattcatcacgccatacttgaggtttcttcacacgcactcactcaagatagaatt
gctggattgaatattaaacaagcaatatttaccaatcttactcaagatcatcttgattat
catcacacacttgataaatatcaagcaaccaaagaaaaattatttgttcttgatactgtt
gaatctgttattcttaaccaagatgatagtcattacaaacattttctaaatatcactaaa
gataaaaaacgaatcagctactctctaggtgattttgactcaatcaaaaccattgaacaa
ggctttttagtgcaattagaccattatgtttttgaaatcccatttttaggtgagtttaat
ttactgaacattttggcagcattgaacagtgttgaggcgcttggatttaaacgtgatgat
attattccgctattttatcaactattgccaccacctggtagaatgcaaagaattgagcct
catcttgcttggatagattatgcccatacacctgatgccatcgggaatgccatcaccact
ttgaaaaaacactatccaaacttcaaaattcgtattgtctttggttgtggcggtaaccga
gacaaagataaacgcgcagaaatgggcaaaattgcctcaaatctagcggatactattatt
ttaaccaatgacaaccctaggtctgaaaatccaaaaaccattattgaaaacatcttaagt
ggcattgacgatagttacaaattagacattattgaaaatagacagcttgctatcgaaacg
gcaatcacaacactcaaagaaaatgaatgcttactaattgctggcaaaggacatgaaacc
atacaacaattctctgataaaacaatctacctaaatgacttagaaattgcacaaaatagc
actaaagctatttaa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-RMA (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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