KEGG   Candidatus Ruthia magnifica (Calyptogena magnifica): Rmag_1040
Entry
Rmag_1040         CDS       T00438                                 
Name
(GenBank) protein translocase subunit yidC
  KO
K03217  YidC/Oxa1 family membrane protein insertase
Organism
rma  Candidatus Ruthia magnifica (Calyptogena magnifica)
Pathway
rma02024  Quorum sensing
rma03060  Protein export
rma03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rma00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Rmag_1040
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Rmag_1040
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Rmag_1040
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:rma03029]
    Rmag_1040
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rma02044]
    Rmag_1040
Mitochondrial biogenesis [BR:rma03029]
 Mitochondrial quality control factors
  Mitochondrial respiratory chain complex assembly factors
   Complex-IV assembly factors
    Rmag_1040
Secretion system [BR:rma02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Rmag_1040
SSDB
Motif
Pfam: YidC_periplas 60KD_IMP
Other DBs
NCBI-ProteinID: ABL02744
UniProt: A1AXT7
Position
1120130..1121755
AA seq 541 aa
MNNQKNFLIVAIFLSVFLLWDKWGVTHVVGANGNLISQTKIKDASTINNSLTNKNLNASS
IIHRNAELDLPNTITKNQAPFTTVVTDLLTLEISHKGGTIQNAWLNDYPIEINSEQKFQL
LSNKADEIFQAQSGLLPQGQTPTHHSIFSSKNSHYQMDGNSLVVPFTWKSENGIKVIKRY
HFNKNSYVIGIDYQITNTTNNTLNITSYTQLVRNALDQSNMIIPTYTGGARFDDQDVYEK
IEFEDFNDQPKTTSKGGWIAMIEHYFFVAAIPDVNQIHTYSSKIINGEYLLTVVNPELVI
APGAIVTLPSSSLYIGPKEQKQINNVAPGLDKTVDYGVLFIIAKPLSELLNWIYSIIHSW
GYSIITLTLLIKLAFYKLSEKSYRSMAGMRQLAPRLTKLKETYGDDKQKLGQKTMELYKK
EKINPASGCLPILVQIPVFISLYWVLLEMVELRQAPFWYLTDLSAQDPYYILPLIMGVSM
FAQQKLNPPPPDPMQAKIMMALPFVFTIFFLWFPSGLVLYWVVNNILSITQQWVINKRIN
G
NT seq 1626 nt   +upstreamnt  +downstreamnt
atgaacaatcaaaaaaattttcttattgttgctatttttttaagtgtttttctcttatgg
gataagtggggggtaacacatgtagtgggtgcaaacggtaatttaatcagccaaacaaaa
attaaagacgctagcacaataaacaattccttgacaaataagaacctaaacgcgtccagc
attatacatcgtaatgccgaattagatcttcctaatactattacaaaaaatcaagctcca
tttacaacagtcgtaacagatttactaactctagaaattagccacaagggtggcactatc
caaaatgcatggcttaatgattacccaatagagattaattctgaacaaaaatttcaactg
ctcagtaataaagctgatgaaatattccaagcacaaagtggtttattgccgcaaggacaa
acccctacccatcactcaatatttagttcaaaaaatagccattatcaaatggatggcaat
agcttggttgtgcctttcacttggaaaagtgagaatggtatcaaagtcatcaaacgatat
cactttaacaaaaacagctacgtgattggtattgattaccaaataactaatactactaac
aatacactaaatataactagttacacacaattagttcgcaatgcgctcgaccagtccaat
atgataataccaacctacacaggtggtgcaaggtttgatgatcaggatgtatatgaaaaa
atagagtttgaagattttaacgaccaaccaaaaaccacctctaaaggcggttggatagca
atgattgagcattacttttttgtggctgcaatcccagatgtaaaccaaatacatacttat
tcatcaaagattatcaatggtgagtatttactaaccgttgtaaacccagaattagtaatt
gcacctggtgcaatagtaactctaccaagcagtagcctttatatcggacctaaagagcaa
aagcaaattaacaatgttgctccaggcttagacaaaactgttgactatggtgtgttgttt
attattgccaagccattatctgagctacttaactggatttattcaataattcactcttgg
ggttattctattatcacccttactttgttaattaaattagcgttttataaactcagcgaa
aaatcataccgctcaatggcaggcatgcgacagcttgccccaagattaacaaaacttaaa
gagacctatggtgatgacaagcaaaaactaggtcaaaaaactatggaattatataaaaag
gaaaaaattaatcctgcctctggctgtttacccattttagtacaaattcctgtatttatt
tcactctactgggtgctattagaaatggttgaattgcgtcaagcaccgttttggtattta
accgatttatcagctcaagacccttactatattttgccacttattatgggtgtttcaatg
tttgctcaacaaaaactaaatccaccgccgcctgacccaatgcaggcaaaaattatgatg
gcattgccttttgtatttaccattttcttcctatggttcccatctggattggtgctttat
tgggtggtcaataacatcttatcaatcacccaacaatgggtgattaataaacgcattaat
ggctaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (27)   

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