KEGG T00351: Rmet

Cupriavidus metallidurans: Rmet_2048

Entry

Rmet_2048 CDS T00351

Gene name

odhL

Definition

dihydrolipoamide dehydrogenase (EC:1.8.1.4)

Orthology

K00382

dihydrolipoamide dehydrogenase [EC:1.8.1.4]

Organism

rme Cupriavidus metallidurans

Pathway

rme00010	Glycolysis / Gluconeogenesis
rme00020	Citrate cycle (TCA cycle)
rme00260	Glycine, serine and threonine metabolism
rme00280	Valine, leucine and isoleucine degradation
rme00620	Pyruvate metabolism
rme01100	Metabolic pathways
rme01110	Biosynthesis of secondary metabolites
rme01120	Microbial metabolism in diverse environments

Module

rme_M00009	Citrate cycle (TCA cycle, Krebs cycle)
rme_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rme_M00307	Pyruvate oxidation, pyruvate => acetyl-CoA

Class

Metabolism; Carbohydrate metabolism; Glycolysis / Gluconeogenesis [PATH:rme00010]
Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:rme00020]
Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:rme00620]
Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:rme00260]
Metabolism; Amino acid metabolism; Valine, leucine and isoleucine degradation [PATH:rme00280]

SSDB

Motif

Pfam:

Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 GIDA HI0933_like NAD_binding_8 FAD_oxidored DAO 3HCDH_N AlaDh_PNT_C FAD_binding_3 Amino_oxidase Thi4 2-Hacid_dh_C Lycopene_cycl

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1:complement(2216565..2217989)

AA seq 474 aa
MSKQFDVLVIGAGPGGYIAAIRAAQLGLNVACLEGNAYDDPKGEARLGGTCLNVGCIPSK
ALLASSEEFENASHHLADHGITVGDVKVDVAKMLKRKDDIVSKMTKGIEFLFRKNKVTLF
KGYGKFTGKAAEGFQVEVNGETLTAKQVIIATGSKARHLPGVAVDNNLISDNEGALKFGT
VPKKLGVIGAGVIGLELGSVWRRLGAEVTVLEALPAFLGAADEGVAKEAQKLLTKQGLQF
HLSVKVDEVKTGKDNVTVNYTDKDGKAQTLEVDRLIVSVGRVPNTDNLGLDAVGLGVDQR
GFIEVDDHCQTKVPGIWAIGDVVRGPMLAHKAEDEGVAVAERIVGQKPHIDFNTVPWVIY
TFPEIAWVGKTEQQLKAEGREYKSGQFPFMANGRALGMGASDGFVKMLADARTDEILGVH
IVAANASDLIAEAVVAMEFKAASEDIGRVCHPHPSMSEVMREAALAVDKRQLNM

NT seq 1425 nt +upstreamnt +downstreamnt
atgagcaaacaattcgacgtgctggtgatcggcgccggccccggcggctatatcgccgcc
atccgcgctgcccagttgggcctgaacgtggcttgcctggaaggcaacgcctatgacgat
ccgaagggcgaagcacgcctgggcggtacctgcctgaacgtgggctgcattccgtccaag
gcactgctggcttcctcggaagagttcgagaacgcctcgcatcacctggccgaccatggc
atcaccgtgggcgacgtcaaggtcgacgtggccaagatgctcaagcgcaaggacgacatc
gtcagcaagatgacgaagggcatcgagttcctgttccgcaagaacaaggtgaccctgttc
aagggctacggcaagttcaccggcaaggctgcagaaggcttccaggtggaagtgaatggc
gagacgctgaccgccaagcaggtcatcatcgccacgggctcgaaggctcgccatctgcca
ggcgtcgctgtcgacaacaacctgatcagcgataacgaaggcgcgctgaagttcggtacc
gtgccgaagaagctgggcgtgatcggcgccggcgtgatcggcctggagctgggctcggtg
tggcgccgtctgggtgccgaagtgaccgtgctggaagcgctgcccgcattcctgggcgcc
gccgacgaaggcgtggccaaggaagcgcagaagctgctgaccaagcaggggctgcagttc
cacctgagcgtcaaggtcgacgaagtgaagaccggcaaggacaacgtcacggtcaactac
accgacaaggacggcaaggcgcagacgctggaagtcgatcgcctgatcgtgtcggtgggc
cgcgtgccgaacaccgacaacctcggcctggacgccgtgggcctgggcgtggaccagcgt
ggcttcatcgaggtggacgaccactgccagaccaaggtgccgggcatctgggcaatcggc
gacgtggtgcgtggcccgatgctggcccacaaggcagaagacgaaggcgtggccgtggcc
gaacgtatcgttggccagaagccgcatatcgacttcaacacggttccctgggttatctac
acgttcccggaaatcgcgtgggtcggcaagaccgagcagcaactcaaggccgaaggccgc
gagtacaagtcgggccaattcccgttcatggccaatggccgtgcgctgggcatgggtgct
tcggacggtttcgtgaagatgctggccgatgccaggaccgacgagatcctgggcgtgcac
atcgtggccgcgaatgcatcggacctgatcgccgaagccgtggtggcgatggagttcaag
gctgcgagcgaagatatcggtcgcgtctgccacccgcacccgtcgatgtcggaagtcatg
cgcgaagccgcgctggccgtcgacaagcgtcagctcaacatgtaa

All links

Pathway (11)   
   KEGG PATHWAY (8)   
   KEGG MODULE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-RME (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (17)   
   Pfam (17)   
All databases (49)   

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