KEGG   Cupriavidus metallidurans: Rmet_4888
Entry
Rmet_4888         CDS       T00351                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rme  Cupriavidus metallidurans
Pathway
rme00010  Glycolysis / Gluconeogenesis
rme00020  Citrate cycle (TCA cycle)
rme00260  Glycine, serine and threonine metabolism
rme00280  Valine, leucine and isoleucine degradation
rme00310  Lysine degradation
rme00380  Tryptophan metabolism
rme00620  Pyruvate metabolism
rme00630  Glyoxylate and dicarboxylate metabolism
rme00640  Propanoate metabolism
rme00785  Lipoic acid metabolism
rme01100  Metabolic pathways
rme01110  Biosynthesis of secondary metabolites
rme01120  Microbial metabolism in diverse environments
rme01200  Carbon metabolism
rme01210  2-Oxocarboxylic acid metabolism
rme01240  Biosynthesis of cofactors
Module
rme_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rme_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rme_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
rme_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rme_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rme00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    Rmet_4888 (lpdA)
   00020 Citrate cycle (TCA cycle)
    Rmet_4888 (lpdA)
   00620 Pyruvate metabolism
    Rmet_4888 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    Rmet_4888 (lpdA)
   00640 Propanoate metabolism
    Rmet_4888 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Rmet_4888 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    Rmet_4888 (lpdA)
   00310 Lysine degradation
    Rmet_4888 (lpdA)
   00380 Tryptophan metabolism
    Rmet_4888 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    Rmet_4888 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rme04147]
    Rmet_4888 (lpdA)
Enzymes [BR:rme01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     Rmet_4888 (lpdA)
Exosome [BR:rme04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   Rmet_4888 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox_3 Pyr_redox GIDA Thi4 Lys_Orn_oxgnase FAD_binding_2 HI0933_like FAD_binding_3 FAD_oxidored AlaDh_PNT_C NAD_binding_8
Other DBs
NCBI-ProteinID: ABF11750
UniProt: Q1LDM6
Position
megaplasmid:complement(1549938..1551380)
AA seq 480 aa
MNTNQNAQTAQTVQTVQTDVAIIGAGTAGLAAYRAAIAAGKRAVIIEGGAYGTTCARVGC
MPSKLLIAAAEAAHEARHTAAFGVHVDGPVRIDGREVMQRVRSERDRFVGFVVRGVESIP
QDDRLIGRARFIDNTILQVDDHTVVRASRVVIATGSRPAVPPSFGVFGDRLIVNDDVFSW
EDLPQSVAVFGPGVIGLELGQALSRLGVRVRVFGVGGGVGPLSDPEIRAYAAKSFNQEFS
LLADARVLEMRREGDDAVITFEDADGQTVTERFAYVLAATGRRPNVDTLALGNTALELDG
RGVPTFDPVTLQCGESPIFIAGDANNVLPLLHEAADEGKIAGENAALWPKVGPLTRRAPI
AVVFSDPQIAMVGKRFAELTPGSFVTGEVSFEDQGRSRVMLKNRGLMHVYADRATGRFIG
AEWIGPRAENIAHLLAWSYQQGLTIAAMLAMPFYHPVVEEGLRTALRDAQAKLAQLQEAA
NT seq 1443 nt   +upstreamnt  +downstreamnt
atgaacacgaaccagaatgcccagaccgctcaaactgtccagaccgtccagactgatgtg
gccatcatcggcgcgggcactgccggcctggccgcctaccgcgcggccattgccgccggc
aagcgcgccgtgatcatcgagggcggggcgtatggcacgacctgcgcccgcgtgggctgc
atgccgtcgaagctgctgattgccgcggcggaagccgcgcacgaagcgcgtcacactgct
gcatttggcgtgcacgtggatggcccggtccgtatcgacggcagggaagtcatgcagcgc
gtgcggagcgaacgcgaccgctttgtcggcttcgtggtgcgcggcgtggagagcattccc
caggacgaccgcctgatcggccgggcgcggttcatcgacaacacgatcctccaggttgac
gaccacaccgtcgtgcgcgcaagccgcgtggtaatcgccacgggctcgcgccccgccgta
ccgccgtcctttggcgtgttcggcgatcgcctgatcgtcaatgacgatgtgttctcgtgg
gaagacctgccccaaagcgtggccgtgttcggcccgggcgtgattggtttggaactgggg
caagcactgtcgcggcttggcgtgcgggtgcgcgtgtttggtgtcggtggcggcgtcggt
ccgttgtcggaccccgagattcgtgcttacgctgccaagtccttcaaccaggaattctcg
ctgttggcggatgcgcgcgtgcttgagatgcgccgcgagggcgacgacgccgttatcacg
ttcgaagacgccgacggccagaccgtgacggagcgctttgcctacgtgctggccgccacg
ggtcgccggcccaatgtcgatacgcttgcgctgggcaacaccgcgctggaactcgatggg
cggggcgtaccgacgttcgacccggtgacgctccagtgcggtgaatcgccgatcttcatc
gctggcgatgccaataacgtcctgccgctgctgcatgaggcggccgacgaaggcaagatt
gctggcgaaaacgctgcgctctggccgaaggtcgggccgctgacgcggcgcgcgccgatc
gcggtggtgttctccgatccgcagatcgcgatggtcggcaagcgttttgccgaactgaca
ccgggcagcttcgtgactggcgaggtcagcttcgaggatcagggccgcagccgtgtgatg
ctcaagaaccgtgggctgatgcacgtctacgcggatcgcgccacaggccgctttattggc
gctgagtggattggcccgcgcgccgagaatatcgcgcatctgctggcgtggtcgtaccaa
caggggctgacgatcgccgcgatgctggccatgcctttctaccatcccgttgtggaagag
ggcttgcgcacggcgctgcgtgatgcgcaagccaagctggcgcaattgcaggaagccgcc
tga

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