KEGG   Rhodothermus marinus SG0.5JP17-172: Rhom172_0300
Entry
Rhom172_0300      CDS       T01606                                 
Name
(GenBank) Radical SAM domain protein
  KO
K10026  7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
Organism
rmg  Rhodothermus marinus SG0.5JP17-172
Pathway
rmg00790  Folate biosynthesis
rmg01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rmg00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00790 Folate biosynthesis
    Rhom172_0300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rmg03016]
    Rhom172_0300
Enzymes [BR:rmg01000]
 4. Lyases
  4.3  Carbon-nitrogen lyases
   4.3.99  Other carbon-nitrogen lyases
    4.3.99.3  7-carboxy-7-deazaguanine synthase
     Rhom172_0300
Transfer RNA biogenesis [BR:rmg03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    Rhom172_0300
SSDB
Motif
Pfam: Radical_SAM
Other DBs
NCBI-ProteinID: AEN72248
Position
complement(324514..325215)
AA seq 233 aa
MRSYRIKAIWKTLQGEGFFAGRPAVFVRFVGCNLWSGRDEDRARDARRTGADCPRWCDTD
FRKEGSRAYTADELVAAMQEVGGPIQFCVLTGGEPLLQLDAALMRALKAAGYFVAIETNG
TISLREACTDPETGQVVAPDWIVCSPKLPEDRLALEYFDELKLVVPDYRPEQYARFARRA
RPHRVGGRRIPLLWLQPEDGPRLAEAQRCAVELALAHPDWRVSVQTHKILGVP
NT seq 702 nt   +upstreamnt  +downstreamnt
atgcgaagctatcggatcaaagcaatctggaagacgctgcagggcgagggtttctttgcc
gggcgcccggccgtgttcgtgcgctttgtgggctgcaacctgtggtcgggccgcgacgaa
gaccgagcgcgcgacgcccggcgcacaggcgccgactgtccgcgctggtgcgacacggac
tttcggaaggaaggcagccgcgcctacacggccgacgaactggtggcggccatgcaggag
gtgggcggaccgattcagttctgcgtactcacgggcggggagccgctgctgcaactcgat
gcggcgctgatgcgcgcgctgaaggcggccggatacttcgtggccatcgagacgaacggc
acgatcagcctgcgcgaggcctgcaccgatcccgagaccggccaggtcgtggcacccgac
tggatcgtgtgcagtccgaagttgcccgaggatcggctggcgctggagtacttcgacgag
ctgaagctggtcgtgcccgactaccggcccgagcagtacgcgcgttttgcgcggcgggcg
cggccgcaccgggtgggcggccgccgcattccgctgctgtggctgcagcccgaggacggt
ccccgcctggcggaagcacagcgctgcgccgtcgaactggcgctggcccatcccgactgg
cgcgtctccgtccagacccacaaaatcctcggcgtaccgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (22)   

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