KEGG T01606: Rhom172

Rhodothermus marinus SG0.5JP17-172: Rhom172_1092

Entry

Rhom172_1092 CDS T01606

Definition

succinyl-CoA ligase (ADP-forming) subunit beta (EC:6.2.1.5)

Orthology

K01903

succinyl-CoA synthetase beta subunit [EC:6.2.1.5]

Organism

rmg Rhodothermus marinus SG0.5JP17-172

Pathway

rmg00020	Citrate cycle (TCA cycle)
rmg00640	Propanoate metabolism
rmg00660	C5-Branched dibasic acid metabolism
rmg01100	Metabolic pathways
rmg01110	Biosynthesis of secondary metabolites
rmg01120	Microbial metabolism in diverse environments

Module

rmg_M00009	Citrate cycle (TCA cycle, Krebs cycle)
rmg_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:rmg00020]
Metabolism; Carbohydrate metabolism; Propanoate metabolism [PATH:rmg00640]
Metabolism; Carbohydrate metabolism; C5-Branched dibasic acid metabolism [PATH:rmg00660]

SSDB

Motif

Pfam:

ATP-grasp_2 Ligase_CoA ATP-grasp_5 Succ_CoA_lig SDH_alpha DUF2188 GARS_A

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1265341..1266528

AA seq 395 aa
MKLHEYQAKDILQRYGVATQPGYVARTVEEAVEAARRLQQEQGYELFVVKAQIHAGGRGK
GGGVKLAKGIEEVREKAGAILGMNLVTPQTGPEGQKVRAVLVAGAVDIAKEYYLGITLDR
QRSQNVIMASTEGGVEIEEVAARSPEKILKVWVDPTIGLRPFQARQLAFGLGFEGNAFKQ
AVQFIQALYRAYEETDSSLAEINPLVLTKQGDVVAVDAKINLDDNALFRHPDLAELRDIH
EEDPLEVEASKYRLNYVRLTGNVGCMVNGAGLAMATMDLIKLAGGEPANFLDVGGGASPE
TVEAGFRIILKDPNVKVILVNIFGGIVRCDRVARGIVEAARKVQINVPLIVRLQGTNAEE
ARAILEQSGLEIETATLFKEVADKVNQALQRVAAA

NT seq 1188 nt +upstreamnt +downstreamnt
atgaaactgcacgagtatcaggccaaggatattctgcaacgctatggcgtggccacgcag
cccggttatgtggcccgcaccgtggaggaagcggtcgaagccgcccgtcgcctgcagcag
gagcaggggtatgagctgttcgtggtgaaggcgcagattcacgccggcggtcgcggcaag
ggcgggggcgtcaagctggcgaagggtatcgaggaggtgcgcgagaaggccggcgccatt
ctgggcatgaacctggtcacgccccagacgggccctgagggacagaaagtgcgggccgtg
ctggtggccggtgccgtcgatattgcaaaggaatactatctgggcatcacgctggaccgc
cagcggagccagaacgtgatcatggcctcgacggaagggggcgtggagatcgaggaagtg
gccgcccggagccccgagaagatcctgaaggtgtgggtcgatcccacgatcggcctgcgt
ccgttccaggcacgccagctggccttcgggctgggcttcgagggcaacgccttcaaacag
gccgtccagttcatccaggcgctctatcgggcttacgaagaaaccgacagctcgctggcc
gagatcaacccgctcgtgctgacgaagcagggcgacgtggtggccgtcgatgccaagatc
aacctggacgacaacgcgcttttccggcatcccgatctggccgagctccgcgacatccac
gaagaagacccgctggaggtcgaggccagcaagtaccggctcaactacgtgcggctcacc
ggcaacgtaggctgcatggtgaacggagccggcctggccatggccacgatggacctgatc
aagctggcgggcggcgagccggccaacttcctggacgtgggcggtggggccagcccggag
accgtggaggccggcttccgcatcatcctgaaggacccgaacgtcaaggtgattctggtg
aatatcttcggcggcatcgtgcgctgcgaccgcgtcgcccgcggcatcgtcgaggcggcc
cgaaaggttcagatcaacgtgccgctgatcgtgcggctgcagggcaccaatgctgaagaa
gcgcgtgccattctggagcagagcggcctggaaatcgagacggccacgctcttcaaagag
gtggccgacaaggtgaaccaggcgctgcagcgcgtcgccgcagcctga

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-RMG (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (34)   

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