KEGG T01606: Rhom172

Rhodothermus marinus SG0.5JP17-172: Rhom172_2720

Entry

Rhom172_2720 CDS T01606

Definition

UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)

Orthology

K01928

UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]

Organism

rmg Rhodothermus marinus SG0.5JP17-172

Pathway

rmg00300	Lysine biosynthesis
rmg00550	Peptidoglycan biosynthesis

Class

Metabolism; Amino acid metabolism; Lysine biosynthesis [PATH:rmg00300]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:rmg00550]

SSDB

Motif

Pfam:

Mur_ligase_M Mur_ligase_C Mur_ligase

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(3104412..3105914)

AA seq 500 aa
MTRVLQRLERERLLQTVVGSATARKLTHLTDDSREVQPRGLFVAVRGERVDGHRFIEQAI
ERGAAAVVGEVMPEAFAERFPKVTFVQVSNSRRALGILATIFHMNPGRRLRLIGITGTNG
KTTTAFLVYHMLNAIGQETGLIGTVCYLFGRHELPASNTTPGPIELNHLLRRMTGVPCKN
CVMEVSSHALEQERVAGLSFSIAVFTNLTRDHLDYHGSFEAYLKAKKKLFDGLTFRATAL
YNIDDPSGPAMVADTQACCISYGQREDAQLRMRIVGHSLEGLTLNIDGRFQRFPLVGRFN
AYNLLAAYGVGRAMGLDPDLLLEALGRVPQIPGRFERFTFEDGTTAIVDYAHTPDALENV
LRTIREVMPEGARLWCVFGCGGERDRGKRPMMGAVAERLADCVIVTSDNPRSEDPLQIFE
DIRQGMRHPEAALWEVDRARAIEQAAKLCRPGDVVLVAGKGHEAYQIIGTEKIPLDDRQL
VQEYFEHYHTPARPPSIRFL

NT seq 1503 nt +upstreamnt +downstreamnt
ttgacccgggtgctccagcggctggagcgtgagaggctgttgcagacggtcgtcggatcg
gcgaccgcgcggaagctcacgcacctgacggacgacagccgggaggtgcagccgcgcggg
ctgtttgtcgccgtgcggggcgagcgcgtcgatggccatcggttcatcgagcaggccatc
gaacggggcgccgcggccgtggtgggtgaagtcatgccggaggcgttcgccgaacgcttt
cccaaagtcaccttcgtgcaggtgtccaacagccggcgggcgctcggcatactggccacg
atctttcacatgaatccgggccggcggctgcgtctgatcggcatcacgggcaccaacggc
aaaacgacgaccgctttcctggtctatcacatgctgaacgccatcggccaggaaaccggt
ctgatcgggacggtctgctacctgttcggccgacacgagcttccggcgtcgaataccacc
ccggggcccatcgagctgaaccacctgctgcgacgcatgacgggcgttccctgcaagaat
tgcgtcatggaggtctcctcgcatgcgctggagcaggagcgggtggccggcctgtcgttc
tccatcgcggtctttacgaacctgacgcgcgaccacctggattatcacggttcgttcgag
gcctatctgaaagccaaaaagaagctctttgacgggctgacgtttcgggccacggcgctt
tacaacatcgacgatcccagcggtcccgccatggtggccgacacccaggcctgctgcatc
agctacggccagcgggaagatgcccagttgcgcatgcgcattgtcggccacagcctggaa
ggcctgacgctcaacatcgacgggcgctttcagcgctttccgctggtgggccgcttcaac
gcctacaacctgctggccgcttacggggtggggcgggccatgggactggatcccgacctg
ctgctggaggcgctggggcgcgtgccgcagattcccggccgcttcgaacgcttcacgttc
gaagacggcaccacggctatcgttgactatgcgcacacgcccgatgcgctcgaaaacgtg
ctgcggacgatccgcgaggtgatgcccgaaggggcgcgtctgtggtgcgtcttcggatgc
ggaggcgagcgcgatcggggcaagcggcccatgatgggcgccgtggccgagcgcctggcc
gactgcgtaatcgttaccagcgacaacccgcgctccgaagatccgctccagatttttgaa
gacattcgccagggcatgcggcaccccgaagcggcgctgtgggaggtggaccgggcccgg
gccatcgagcaggccgcgaagctatgccgcccgggcgatgtggtgctggtggccggtaaa
gggcacgaggcctatcagatcatcggcaccgaaaagattccactggacgatcgtcagctg
gtgcaggaatacttcgaacactaccacacgccggcgcgtccgccttcaatccggtttctg
taa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-RMG (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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