KEGG T01606: Rhom172

Rhodothermus marinus SG0.5JP17-172: Rhom172_2811

Entry

Rhom172_2811 CDS T01606

Definition

beta-N-acetylhexosaminidase (EC:3.2.1.52)

Orthology

K12373

hexosaminidase [EC:3.2.1.52]

Organism

rmg Rhodothermus marinus SG0.5JP17-172

Pathway

rmg00511	Other glycan degradation
rmg00520	Amino sugar and nucleotide sugar metabolism
rmg01100	Metabolic pathways
rmg01110	Biosynthesis of secondary metabolites

Class

Metabolism; Carbohydrate metabolism; Amino sugar and nucleotide sugar metabolism [PATH:rmg00520]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:rmg00511]

SSDB

Motif

Pfam:

Glyco_hydro_20 Glyco_hydro_20b CHB_HEX_C CHB_HEX_C_1 CHB_HEX Fn3_assoc Glycohydro_20b2

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

3214530..3217106

AA seq 858 aa
MRTVRILLLTGLLPALTLARHPERLTVYWGVVANQDNGRARWELTLVNQDTVALPASGWT
LYFNFMRPILPESAPPSVRLTHVNGDFYRLDPTDTFAPLPPGARRTLSFESMGPLIKAID
APSGLYLVFQEAPNRPVPIQDVRVLPFASEFQTRRHPADRLPVPTPALRYYRNASLRLLP
VDSLTPVVPTPRQLTRRQGHWTLDRTATIAYEPTLAREAAFLADALAPLLGARPRLLEGA
DRPATIRLRLGAVRLSDGPAGPEAYHLVVDPEAGITLTGTDAAGVFYGIQTLQQLIDPAF
YRRPSAAIPIPALEVYDAPRFGYRGLHLDVARNFQPKAVVLRLLDLMARYKLNRFHFHLT
DDEGWRLEIDGLPELTEVGGCRGHTETEATCLVPSHGSGPIPGQLPGSGYYTREDFVEIL
RYATARHIEVIPEIDVPGHARAAIKAMEARYARLKVAGRPEAEAAAYRLVDPADTSSYRS
VQGWNDNVINVCLPSTYRFLEKVVDELRRLYDEAGAPLRVVHTGGDEVPHGAWAGSPACR
AVMQTEGTADPAALQQYFLDRFDQILRQRGLRTAGWEEIGLIAAEENGRRVHRPNPRFRD
RGFLVYAWNNIWGSGAEDHAYRLANAGYDVVLSLASNLYFDLAYTKHPDEAGLYWAGFVD
NDAPYRLEPFDLFLGPIQHWLGHTLPPEAFAHHERLTAEGRPRIVGLQGQLWGETLRTPD
RVFYMAVPRMLALAERAWAERPAWSRIADPEARQRALQAAWNAFANRLGRRELPRLDALY
GETVPYRLPPPGAVVEDGYLKANVALPGLTIRYTLDGSTPTAASPRYTEPVRLEGHGEVH
LRTFDTNGRGSRTVRVVY

NT seq 2577 nt +upstreamnt +downstreamnt
atgcgaaccgttcggattctgctgctgaccggcctgctgcctgccctgacgctggcccgg
caccccgagcgcctgaccgtttactggggcgtggttgccaaccaggacaacggccgggcc
cgctgggaactgaccctggtcaaccaggacaccgtggcgctgcccgcctcgggctggaca
ctctatttcaacttcatgcgtccgatcctgcctgaaagcgccccgccttcggtgcggctc
acgcacgtcaacggcgacttctaccgcctggaccccaccgacacgttcgcgccgctgccg
ccgggcgcacgccgcacgctgtcgttcgaatcgatgggtcccctcatcaaggccatcgac
gctccctcggggctctacctcgtcttccaagaggcgccgaaccgtccggtcccgatccag
gatgtgcgcgtgctgcccttcgcctcggagtttcagacgcggcgacatccggccgatcgg
ctgcccgtacccacgccggccctgcgctactaccggaacgcctcgctccgactgctgccg
gtcgatagcctgacaccagtcgttcccaccccgcgccagctcacgcgtcggcaagggcac
tggacgctcgaccgcacggccaccatcgcttacgaaccgacgctggcccgcgaggcggcc
ttcctggccgacgccctggcgccgctgctgggcgcacggccccgcctgctggaaggcgcc
gaccggcccgccacgatccgcctgcgcctcggcgcggttcgcctgtccgatgggccggcc
ggtccggaagcctaccatctggtcgtggatccggaggcgggcatcacgctcaccggcacc
gacgccgccggggtcttctacggcatccagacgctgcaacagctcatcgacccggctttc
taccgtcggccttcggcggccatcccgatcccggccctcgaagtgtacgacgcgccgcgc
ttcggctaccgggggctgcacctcgacgtggcccgcaatttccagccgaaggcggtggtg
ctccggttgctcgacctgatggcgcgctacaagctcaaccggttccactttcacctgacc
gacgacgagggctggcgcctggagatcgacggcctgcccgaactgaccgaggtgggcggc
tgccgcggccacaccgaaacggaagcaacctgtctggtgccctcgcacggctccggaccg
atccccggccaactgcccggaagcggctactacacgcgcgaggactttgtcgaaatcctg
cgctacgccacggcccggcacatcgaggtgatccccgaaatcgacgtgcccggccacgcc
cgcgcggccatcaaagccatggaagcccgctatgcccgcctgaaggtggccggccgccct
gaagccgaagcggccgcctaccggctcgtcgatccggccgacacgtcctcttaccgctcc
gtgcagggctggaacgacaacgtgatcaacgtctgtctgccctcgacctatcgctttctg
gaaaaggtggtggacgaactccggcggctctacgacgaagccggggcgccgctccgcgtg
gtgcacaccggcggcgacgaggtgccgcacggcgcctgggccggctcgcccgcctgccgg
gccgtcatgcagaccgagggcaccgccgatccggccgcgctgcagcagtacttcctggat
cggttcgatcagatcctgcgacaacgcggactgcgcacggcgggctgggaagagatcgga
ctgatcgctgccgaggaaaacggacggcgcgtgcatcgtcccaacccgcgcttccgcgat
cggggcttcctggtctacgcctggaacaacatttggggcagcggggccgaggatcacgcc
taccggctcgccaatgcgggctacgacgtggtgctctcgctggcctcgaacctgtacttc
gatctggcctacacaaagcatcccgacgaggccggactctactgggcgggcttcgtggac
aacgacgcgccgtaccgcctggagccgttcgatctgtttctggggccgatccagcactgg
ctgggccacacgctcccgcccgaagcgttcgcccaccacgagcgcctgacggccgaagga
cggcctcgcatcgtggggctacaggggcagctctggggcgagacgctccgcacgccggac
cgcgtcttctacatggccgtgccccggatgctggcgctggccgaacgcgcctgggccgaa
cgtccggcctggagccggatcgccgatccggaagcacggcaacgcgccctgcaggcggcc
tggaacgcgtttgccaaccggctgggccggcgcgaactgccccggctcgacgcgctctac
ggcgagaccgtgccttaccggctgccgcctcccggcgccgtcgtcgaggacggctacctg
aaggccaacgtggccctgccgggcctgacgatccgctacacgctggacggaagcacgccc
acggccgcctcgccccggtacacggagccggtccggctcgaagggcatggcgaagtgcac
ctgcgcacgttcgacacgaacggacgcggtagccgcaccgtgcgcgtggtttactga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-RMG (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (23)   

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